KEGG   Chitinophaga oryzae: HF329_30405
Entry
HF329_30405       CDS       T07451                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
coy  Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:coy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:coy03400]
    HF329_30405
Enzymes [BR:coy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HF329_30405
    5.6.2.6  RNA 3'-5' helicase
     HF329_30405
DNA repair and recombination proteins [BR:coy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HF329_30405
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QJB35384
LinkDB
Position
complement(7760064..7762514)
AA seq 816 aa
MQQRSRGWKVITGWLADKDLQPFKFQEDAWEAYLEGRSGIVNAPTGFGKTFSLFLGAVIA
WIDAHPKDYQKKTKNGLQLLWVTPLRALAKDLGRAMEEVLRELDIPWEVGIRSGDTPVAT
RARQKLQMPEILIITPESLHLLLAQKEYPSVFRHLHTVVVDEWHELLGSKRGVMAELALS
RLRGLRPTLKVWGISATIGNLDEALEVLLGPYHNGGLIVRANLKKNIALQSVIPHEIENY
PWAGHLGIRMLPQALPIINNSQTTLVFTNTRSQSEIWYQSLLKHEPMLAGALALHHGSID
MELRIWVEEALHNGILKAVVCTASLDLGVDFRPVDTVIQVGSPKGVARFLQRAGRSGHQP
GAISRIFFLPTHALELVEAAALKAAMEEELIESRMPVLLAYDVLLQYLMTLAVSDGFHAP
QIYEEVRKTFCYQDLTEDEWQWILAFLTTGGDALGSYDEFRKLERQGDHYYCKSRMLAMR
HRLHIGTIVSDAMLKVKFMTGGYVGVIEESFISRLSPGDSFTLAGRNLEFVMIKDMTVLV
RKSGAKRTIVPSYQGGRIPLSSNLGRMLRRKFNEALSRRTKDPELIALQPLFNRQEELSH
IPKDNELLIEKITTKDGYHLFVYPFEGRLVHEVMAALLAYRISRIQPITFSIAMNDYGFE
LLSDQPIPLTTENAKALFTTDNLLTELQTSVNATEMARRKFRDIAVIAGLIFQGYPGKHK
ANRHLQSSASLLFNVFKDYDPQNLLLKQAFNEAFFYQMEEARLRETLERIAQSRIVITEP
DKLTPFCFPIKVDSLRDTMTSEKLEDRIKKLIAVNE
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcaacaacgttcacgcggatggaaagtgattaccggatggctggctgacaaggacctt
caacccttcaaattccaggaagacgcctgggaggcgtacctggagggccggtcggggatc
gtgaatgcacctaccggctttggtaaaaccttctcgctcttcctcggcgccgtcatcgcc
tggatcgacgcccatcctaaagactatcagaaaaaaacgaagaacggcctgcagctgctg
tgggtaacaccgctccgcgcgctggccaaagacctgggacgggccatggaagaggtattg
cgcgagctggacatcccgtgggaagtaggtatccgcagcggcgacactcccgtggccacc
cgcgcccgccagaagctgcagatgccggaaatactgatcatcacccctgaaagcctgcac
ctgctgctggcccagaaagaatacccgtccgttttcaggcacctgcacacggtagtggta
gacgaatggcatgagctgctcggcagcaaacgcggcgtcatggcagaactggcgttaagc
cgcctgcgcgggttacggccaaccctgaaagtgtggggcatctccgccactatcggcaat
ctcgacgaagcgctggaagtattgctgggcccttatcacaacgggggactgatcgttcgc
gccaacctgaaaaaaaatatcgccctgcaaagcgtgatcccccatgagatagagaactat
ccgtgggcaggccacctcggcatccgcatgctaccgcaggcgctgcctatcatcaataac
agccagaccaccctggtctttaccaatacacgctcccaatcggagatatggtaccagtcg
ctgctcaaacatgagcccatgctcgccggcgccctggcgctgcatcacgggtccatcgat
atggaactgcggatatgggtggaagaagcgctgcataacggtatcctcaaagcagtggta
tgcaccgccagcctcgacctgggcgtggacttccggccggtagacaccgtcatacaggta
ggcagcccaaaaggggtggcccgcttcctgcaacgggcaggccgtagcggacaccagccg
ggcgccatcagccggattttcttcctgcccacccacgcactggaactggtagaagccgcg
gcgctcaaagccgcgatggaagaagagctgatcgaaagccgcatgcctgtgctgctggca
tatgacgtgttgttgcaatacctgatgacgctcgccgtttccgacggcttccatgcaccg
cagatttatgaagaagtccgtaaaaccttttgctaccaggaccttacggaagatgaatgg
cagtggatactggctttccttaccaccggcggcgacgccctcggcagctacgacgagttc
cgcaaactggagcggcagggcgaccactactactgcaaaagccgtatgctggccatgcgg
caccgcctgcatatcggcactatcgtcagcgacgccatgcttaaagtgaagttcatgacc
ggcggatatgtaggcgttatcgaggagagctttatttcgcggctctcgcccggcgacagc
ttcacgctggccggccgcaatctcgagtttgtcatgatcaaagatatgacggtgctggta
cgcaagtccggcgccaaacggactatcgtgcccagctaccagggcggacgtatccccctg
tcctccaacctcggccgtatgttgcgcaggaagttcaacgaggcgctctcccgccgtacc
aaagatcccgagctgatagcgctgcagccgctgttcaaccggcaggaagagctgtcccac
atcccgaaagacaatgagctgctgatcgaaaaaatcaccaccaaagacggctaccacctt
ttcgtatatcctttcgaaggccggcttgtacatgaggtcatggccgccctgctggcgtac
cgcatcagccgcatacaaccgatcaccttctccattgcaatgaacgactacggctttgag
ctgctgtcggaccaacccataccgctgaccacagaaaacgccaaagcgctgtttaccacc
gataacctgctgacggaactgcaaaccagtgtgaacgccaccgaaatggcacgccgcaaa
ttccgcgacatcgccgttatcgccggcctgatcttccagggttacccgggcaaacacaag
gccaacaggcaccttcagtcgtccgcttccttactgttcaatgtattcaaagactacgac
ccacagaacctgttgctgaagcaggctttcaacgaagcttttttctaccagatggaagag
gcccgtctgcgcgaaacgctggaacgtatcgcgcagagccgtatcgtgatcaccgagccc
gataaactgacgcctttctgcttccctatcaaggtagacagcctgcgggacaccatgacc
agcgagaagctggaagaccggattaaaaaattgattgctgtcaacgaatag

DBGET integrated database retrieval system