Caminibacter pacificus: C6V80_02975
Help
Entry
C6V80_02975 CDS
T06023
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6V80_02975 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_02975 (uvrB)
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6V80_02975 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C6V80_02975 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
ResIII
UvrB
UVR
DEAD
SWI2_SNF2
AAA_30
AAA_22
DUF787
UB2H
Kinesin
Microtub_bd
Astrovir_pp_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QCI27963
LinkDB
All DBs
Position
complement(540367..542412)
Genome browser
AA seq
681 aa
AA seq
DB search
MKRSDLFKLNSNFKPTGDQPQAIEKLSNCIKKGSRYNTLIGVTGSGKTFTMANIIQKLQI
PTLILTHNKTLAAQLYSEFKEFFPQNHVEYFISYYDYYQPEAYLPRQDLFIEKDSSINAE
LERLRVSATASLLEYDDVIVVASVSALYGLGNPLEYKKMVAKIAVGDEINQREFMLRLLS
MGYTRNDKYFERGNFRVNGEVIDIFPTYFEDDVIRVEFFGDEIDRIYTIDYITNEKLQDL
KEITIYAANQFIVGQNRLAEAIQNIEKELQERLKEFEKQGKIIEYQRLKQRTEFDLEMLE
TTGTCKGIENYARHLTGKKPGETPYSLLDYFEIKGKPYLVIVDESHVSLPQFRGMYNGDR
ARKEVLVEYGFRLPSALDNRPYKFDEFINKAPHYLFVSATPGEYELEISTCVAEQIIRPT
GLLDPIVELLPSENQVATLYDRAKEVIARGEKVLVTTLTKKMAEELQKYYLEMGLKVKYM
HSDIDVVERNEIIRGLRSGEFDMLIGINLLREGLDLPEVSMVAILDADKEGFLRSETSLI
QTMGRAARNVNGRVLMFASKIEEPIILDDDLEVLEKIKDKITGSMYRAIKTTISRRIKQK
EYNKKHGITPKSTVRKLDKSLKEEGYEAIAKELKNKNKIPAKEKKAIIAKLRKEMQEAAK
ALEFEKAAMLRDKIEELKKMK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
ataaaaaggagcgatttgttcaaattaaattctaacttcaaaccaacgggagaccaaccc
caagctatcgagaaactcagcaattgcataaaaaaaggaagcagatataatactttaatt
ggtgttaccggaagtggcaaaacctttactatggccaatattatacaaaaacttcaaatt
ccgaccttaattctaacgcacaataaaacattagcggcgcagctttacagcgaattcaaa
gaatttttcccacaaaaccacgtagaatatttcataagttattacgactattatcaacca
gaagcctaccttccaagacaagatttgtttatcgaaaaagatagctctattaacgcggag
cttgaaaggcttagagtcagtgcaacggcaagtttgcttgaatacgacgacgttatagtg
gttgcttccgtctcagcgctatacggtcttggtaaccctcttgaatataaaaaaatggta
gcgaaaatcgccgtgggcgatgaaataaatcaacgtgagtttatgcttagactccttagt
atggggtacacaagaaacgacaaatatttcgaaagaggaaatttcagagtaaacggagaa
gtaatagacatcttcccgacatatttcgaagatgacgtaataagagtcgaattcttcgga
gatgagatagatagaatctatactatcgactatatcacaaatgaaaaattacaagaccta
aaagaaatcacaatttatgctgcaaatcaatttatcgtaggtcaaaaccgcttggcagag
gcgattcaaaatatcgaaaaagagcttcaggaaagactaaaagagtttgaaaaacaaggc
aaaattatagaatatcaacgcttaaaacaaagaaccgaatttgatcttgagatgcttgaa
actacgggtacttgtaaaggaatagaaaactacgcaagacacctaacgggcaaaaaaccg
ggcgaaacgccttattcactacttgattatttcgaaataaaaggaaagccttatttggta
attgtggatgaaagtcatgtaagtttgccgcaatttcgcggaatgtataacggagacagg
gccagaaaagaagtgcttgtggagtatggattcagacttccaagcgcgcttgataacaga
ccttataagtttgacgaattcataaataaagcgcctcattatctattcgtatcggcaact
cccggagaatacgagcttgaaatttcaacatgcgtagcagaacaaatcatccgtcctaca
ggtcttcttgaccctatcgtagagctgctgccaagcgaaaaccaagtagccacgctttat
gacagagcaaaagaagtaattgcaagaggcgaaaaagtacttgtaacgaccctaacaaaa
aaaatggccgaagagcttcaaaaatattatcttgaaatgggacttaaagtaaaatatatg
cactcagacatcgacgtagttgagagaaacgaaataataagaggacttaggtcgggtgaa
tttgatatgctaatcggaatcaacctgcttagagaaggacttgatttgcctgaagtttcg
atggtggcaattttagatgcagataaagagggatttttaagaagtgaaacttctctaatt
cagacgatgggaagggctgctcgtaacgtaaacggacgggttttgatgtttgcaagcaaa
atagaagagccgataattcttgatgatgaccttgaagtacttgaaaaaataaaagataaa
ataactggctcgatgtatagagcgattaaaaccaccatttcaagacgtatcaaacaaaaa
gaatacaataaaaaacacggtattacaccaaaaagtaccgttagaaaacttgataaatcc
ttaaaagaagaaggttacgaagcaattgcaaaagagcttaaaaacaaaaataaaattccg
gctaaagagaaaaaagcgataatcgcaaaactgagaaaagagatgcaagaagctgcaaaa
gcacttgaattcgaaaaagcggcaatgctaagagataaaatagaagagcttaaaaaaatg
aaataa
DBGET
integrated database retrieval system
