Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c15360
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Entry
CLPA_c15360 CDS
T03753
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03420
Nucleotide excision repair
cpat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLPA_c15360 (rep)
03430 Mismatch repair
CLPA_c15360 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c15360 (rep)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLPA_c15360 (rep)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLPA_c15360 (rep)
MMR (mismatch excision repair)
Other MMR factors
CLPA_c15360 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
ResIII
DEAD
AAA_12
AAA_30
Imm71
AAA_22
AAA_11
CarD_TRCF_RID
PcrA_UvrD_tudor
AAA_7
AAA_25
AAA_16
Imm8
Motif
Other DBs
NCBI-ProteinID:
AJA51599
UniProt:
A0A0H3J171
LinkDB
All DBs
Position
1641171..1643177
Genome browser
AA seq
668 aa
AA seq
DB search
MNYSLDKNQTEAVNTKDRNVLIVAAPGSGKTTVIINRTAHLIRKKSVKPENIIIITFTKA
AALNMKERYKRLFNNIQEPFFGTFHGLFYKILKRHYSSINIIQAYESYRVVKKVLEQYID
EVSEDKLREIINDISRYKNSMYSIEEFIPSIEKSIFKECYDAYEIYKFEKNVMDFDDLQL
KCLQLFKDNSRILEGYRSLFKYMLVDEFQDCDSLQIEMLKLLNKGNNLYAVGDEDQCIYG
FRGSRPDCMVNFHKIFSDGKKIYLNINYRSVCNIVDISKNLIKNNRLRNEKNIQSHKSEK
GNINILNNMNESYQAEEISDIILKMKNINELEFKEFAVLYRTNVESRSLIDSFIRKSIPF
RLLDREYNFFQHFICKDILSYLKLSIDKTDKEAFLRIINKPFRYIGKSNLEIVRKHKYRE
DSFELLKSIEDIPIYQMKTIDKLKRDIQKLNKMSLAGAIQCIVNEIGYRDYIVEYAKKYK
LGIQDMEEIIEEFKKAAEEYNAIIRFLAHVDEVSEELKKNKKDISKDAVILSTIHGVKGM
EFKNVFVINCCEENIPHKNSLPDNIEEERRLFYVGITRAIDNLWIGFTKDIRGKAKKPSR
FIEECKLNINGDCRGAYKVGDTVKHMSFGVGKIVALDSEIIEIEFSKGIKRKFDAVIIGN
NRLISRIK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaattattctttagataaaaatcagacagaagcagtaaataccaaagatagaaatgta
ttgattgtagctgcgccgggttctgggaaaactacagttataataaatagaacagcacat
ttaataagaaaaaaatcggttaagcctgaaaatattataattataacttttacaaaggca
gcagcattaaatatgaaggaaagatataaaagactctttaataatattcaggaacctttc
tttggtacttttcatgggcttttttataaaattttgaagagacactatagttcaataaat
attatacaagcctatgaaagttacagagtagtaaaaaaagtacttgaacaatatatagat
gaagtaagcgaggataagcttagagaaataataaatgatatatctagatataaaaactct
atgtattccattgaagaatttataccatctattgaaaaatccatttttaaagaatgttat
gatgcctatgaaatctataagtttgaaaaaaatgttatggattttgatgatttacagctt
aagtgtcttcagttattcaaggataattcaagaattttagagggttatagaagtttgttt
aaatatatgctggtggatgaatttcaagattgcgattctcttcagattgaaatgctgaaa
cttttaaataaaggtaataatttatacgcagtaggggatgaggatcaatgtatatatggg
tttagaggttcaagacctgactgtatggtgaattttcacaaaatttttagtgatggaaaa
aagatatatttgaatataaattatagaagtgtgtgtaatatagtggatatatccaaaaat
cttataaaaaacaataggttgcgaaatgaaaaaaatatacaatcccataaaagcgaaaag
ggaaatataaatatattaaacaatatgaatgaaagttatcaggcagaagaaatatctgat
attattttaaagatgaaaaatataaatgaattggagtttaaggagtttgccgtcttatac
agaaccaatgtggaaagcaggagtttaatagatagttttataagaaagagtatacctttc
aggcttttagatagagaatataatttttttcaacactttatatgtaaagatatattatcc
tatttaaaattaagtattgataaaactgacaaagaggcttttttgagaattataaataaa
ccctttagatacataggaaagtcaaatttggaaatagtcagaaaacataaatatagagaa
gattcctttgaattgcttaaatccatagaagatatacctatttatcagatgaaaactata
gataaattaaagagagacatacaaaagctcaataagatgtctctggcaggagctatacaa
tgcatagtaaatgaaattggctatagagactatattgtagaatacgctaaaaaatacaag
cttggtattcaggacatggaagagataatagaagaatttaaaaaggcagcagaggagtat
aatgctataattagattcttagctcatgtagatgaagtatctgaggagttaaagaaaaat
aaaaaagatatttcaaaggatgctgttatacttagcactatccacggtgtaaagggaatg
gaatttaaaaatgtatttgtcataaactgttgtgaggaaaatatacctcataaaaatagt
ctgccagataatatagaggaagagagaagacttttctatgtagggataaccagggccatt
gataatctctggatagggtttacaaaagatataagagggaaagctaaaaagccttccagg
tttatagaagagtgtaagctaaatattaatggagattgcagaggggcatataaagttgga
gatactgtaaagcatatgtcctttggagtaggcaaaattgtagctttagacagtgaaatt
atagaaattgaattttctaaaggcattaagagaaaatttgatgctgtaataattggaaat
aataggcttataagtaggattaaataa
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