Cucurbita pepo subsp. pepo (vegetable marrow): 111776261
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Entry
111776261 CDS
T05351
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111776261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111776261
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111776261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
111776261
NCBI-ProteinID:
XP_023511433
LinkDB
All DBs
Position
LG15:8722732..8765386
Genome browser
AA seq
2074 aa
AA seq
DB search
MAHLFISDEEFSRHSNDAAFIAEKADAFIQGLYSELETVRAQADAASITAEQTCSLLDQK
FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQTHQLNLLSIGKDGEIERLNTELSEL
HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEIDMELVRSRAEF
AHLSQEKELVERHNAWLNDELTAKVGSIIEMRRLHSDTEAEMSAKLRDVERQLDECSSTL
KWNKDSVKELEMKLTSAQEELCSSRKLAAENEERLCAEISTVNKLVELYKESSEEWSKKA
TELEGVIKALETHLNQVESDYKEKLVKEESERNRLEEVAADLKVKLEKCEAEIELSRKKN
ELTLCPISSFAPDVLINPKESSDVVDDYHKFEPRVPVGVSGTALAASLLRDGWSLAKMYA
KYQETVDALRHEQMGRKEAEAVLQRVLCELEDKAEVILEERAEHEGMIESYSLLNQKLQH
SISEQAILEKSVQELKAVLKRHERDYMLIQRENVDLSRQVTILLKECRDVQLRCGSAGHD
VLENLSTPTSFQINVESDADRVISEYLQLTFKDINGLVEQNVQLRSLVRKLSVQLQDTEL
DFKEKLEAELKSKTQEAASRVEAVLQKVEEQGQMIESLHASVAMYKRLYEEEQKRSLPRS
HSAGVALADFCRKELKFVSEDSQEDTKAALDQASKRVRSLEEELEKSRSEINLVRTERNK
FELESGFAKEKLASFMKEFEQQRVEMNGVLARNVEFSQLLVDYQGKLRKVSESLHNADEQ
SRKLSIEVSILKSEKELLSNAEKRAHDEIRNLSERLFRVQASLDTIRSVEEVHEEARVVE
RRKLEEHAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMSHVEDMGKELANALHA
TAAAEARAAVAEAKLFDLEKKISSSANQVIELDDRSGLKSHPSNQVGIDLHRTEAEIKKF
KEEAQACKEHMLQYKSIAQVNEEAVKQMECAHESFKIEAEKMKKSLEVELLQLRERVAEL
ENESILKSQEIASAARLKEEAIASSLADVRNLNEENAAKTSKILEMEIQISYLKEDLERE
QQKWRTAQANYERQVILQSETIQELTKTSQALASLQEEAAELRKLADAYKTENEELKAKW
EGGKVALEDFKNKADKAYNELNEQNKILHAKLEAFHIRLAEKDQKLAGVSSELNTEMVGD
SGMQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLESALKAVESAQASLNAERQSSKALL
LTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREEFRKAKCETENFESMLKM
RQVEVEACKMEIESQKVEKAHLESRVSELLEKSKNIDYEDYNRVKDDVQRMQMELNEKDA
EIAKVKMLITERQESISQLEQDLSSCRFELKEREKKLNDIQHIEANLRTDMEKQKKFFSQ
FKRKLEIVSKEKDELGKENQALLRQLEDIKQVNIVGKRSTGDSTGEQTIEEKDTKIQILE
KHLERLREELKREKEDSRTEKSRRLKIEKAIKDSYTIVEQEKSKILNDLEKHKGNLKQAS
DELEKLRQSKSNLSEDALPQPLSGIGLDDLASTYVLAAENFEKTVQSVLTDLGAQNATSE
VSLVTDALVQSSTGPDVPLQTPDVAVPVAPVTTNFPAKVLEEREKKGQLSKAKVETRKAG
RKLVRPRLGKPGGSLGDIDMSTSELPNSESKRATSGKSETESESTTSAHQLARKRVATAS
ELHEHAVIPGESITEMAAPVMKKAKGSDTLADDVGGPSSTSLESLKTQSPLEEVPDVCEF
PHGSSEDAADVEKEVEIAGEKADRPKELSSDGSISHEEIHTDRMDENLDKQIVAVSDDGL
KDQAEPDNWHLTSEIGSEREEGEVAPEVMELEGANNVESIEIGDDHIEPVATPDASPSRV
DDDAMAVTDMEIGEINSPEIQNEEKNDEGDAADETSEILDKPTDSNQIDMESDQAVETTS
VATENVSSTPPEINDSKQGSPIVAKRSSPVGSSTSTTINLQERAKERAMLRQAGVVSSLD
RRPVRGLRGRGGRIERGGRGQRSGRGPPGESGRS
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcccacttattcatctccgacgaggagttctctcggcactccaacgacgctgctttt
attgccgagaaggccgatgccttcatccaaggtctatatagcgagctcgagaccgtcaga
gcccaagctgatgctgcttcaatcactgcggagcagacttgttctcttcttgatcagaag
ttcctctctctttccgctgagttctctgacctccagtctcaaaatgcacaacttcaaacg
accctcgaacttagactctccgagcttgccgaagtcaagtcccaaacgcatcagcttaat
ctactttccattggtaaggatggggagatagagaggttaaatacagagttatctgagttg
cataaatcaaaaaggcagttgatggagcttattgagcacaaggacttggaaattggtgaa
aaagattccactataaagagttatcttgataagattgtcaatttgtctgagacagctgct
caaagagaagcccgtatcagtgagatcgacatggagttggtgcgctcccgggctgaattc
gctcatctttcacaggagaaagaacttgttgagaggcataatgcgtggctaaatgatgag
ttaactgctaaagtaggcagtatcatagagatgcgtaggcttcattctgatactgaggct
gaaatgtctgccaaacttagagatgttgagagacagttggatgaatgctctagcacctta
aaatggaacaaggatagtgtgaaagaacttgagatgaagctaacatctgcacaggaggaa
ttgtgttcgtcaagaaaacttgctgcagaaaacgaggaacgtctttgtgctgaaatatca
acagtcaataagcttgttgaactttacaaagaaagttctgaggagtggtctaagaaggca
acagaactcgagggtgtcataaaagccttggagacacatttgaaccaagttgagagtgat
tataaggagaagcttgtaaaggaagaatctgaaagaaatcgtttggaagaggtggctgca
gatttgaaagtgaaactggaaaaatgtgaagcagagattgaacttagtaggaaaaagaac
gaactcactctttgtcccatcagcagctttgctccagatgttttgataaatccgaaggaa
agtagtgatgtggttgatgactatcacaaattcgaacccagggtacctgtgggtgtttct
gggacagctttagcggcttcactgttgcgtgatggttggagtttggccaaaatgtatgcg
aagtaccaagagactgttgatgctttgcggcatgagcagatgggaaggaaagaagctgag
gcagttctgcagagggtgctatgtgaattagaggataaagcagaagtcattttagaggaa
agagccgaacatgagggaatgatcgagtcatattccttgttaaaccaaaaattgcagcat
tctatttctgaacaggcaattttggagaaatctgttcaagaattgaaggctgttttgaag
agacatgaacgtgattacatgttaattcagagagagaacgttgacctttcaagacaggtt
acaattcttctaaaggaatgtcgagacgtacaacttcgctgtggatctgctggacatgat
gttcttgagaatctttcaacacctacatcctttcaaatcaatgtggagtctgatgcggat
agagttatatctgaatatcttcagttaaccttcaaggacataaatggattagttgaacag
aatgtccagctgagaagcctcgtacgtaaactttctgtgcagcttcaagatacagagctt
gatttcaaggagaaactggaggctgaactgaaaagtaaaactcaagaagctgcatctaga
gttgaagcagtgttgcaaaaagttgaagagcagggacagatgattgagtcccttcatgcc
tccgttgccatgtacaaaaggctgtatgaagaggagcagaagcgtagtttgcctcgctcc
cactctgctggagttgctctagcagatttttgtaggaaggaactcaagtttgtttctgaa
gattctcaggaagacacaaaggctgctctggaccaggcttctaaacgagtaagatctctt
gaggaagagcttgaaaaatctagaagcgagataaatttagtaaggactgaacgtaacaag
tttgaactcgagtcaggttttgccaaagaaaaattggctagtttcatgaaggaatttgaa
caacagagagtggaaatgaatggtgtgttggctcgtaatgtggagttctcacaactctta
gtggactaccaaggaaaactgcggaaagtttcagaatccttgcacaatgctgatgaacag
tcccggaaattgagtattgaggtgtccatcttaaagtctgaaaaggagttgttatcaaat
gctgaaaagagagcacatgatgaaatacgaaatttatctgaaagattattccgcgtgcag
gcttctctggataccattcgaagtgttgaagaagttcatgaggaggctagggttgtagaa
aggaggaaactggaggaacatgctaagcaacttgagagggaatgggcagaggcaaagaaa
gagttgcaagaagaaagggacaatgttcgaactctcactcttgatcgtgagaagacttta
aagaatgcgatgagtcatgttgaggacatgggaaaggaactagcaaacgcactacatgcc
actgctgctgctgaggcgagagctgccgtcgctgaggccaaactgttcgatctggagaag
aaaattagttcttcagctaaccaggtcattgagctggatgataggagtggacttaagtct
cacccttcaaatcaggttggcatagatttgcatagaacggaggcagaaattaagaaattt
aaagaagaagcacaagcttgtaaagaacatatgctacagtacaagagcattgcacaggta
aatgaagaagctgtgaaacagatggaatgtgctcatgaatctttcaagattgaggctgag
aaaatgaagaaatcattggaagtcgaacttcttcagcttagagagagggttgctgaactt
gaaaatgaatctattttaaaatctcaagaaatagcttctgctgctagattgaaggaagag
gctattgcatcttccctggcagatgttagaaatctgaatgaagaaaatgctgcaaaaacg
tctaagattctggaaatggaaattcagatatcctatttaaaagaagacttggaaagggaa
cagcaaaaatggcgtactgctcaagctaattacgaaagacaggttattctccagtcagag
acgattcaggagctgacaaaaacatcacaagctttggcttctttacaagaggaagcagct
gagcttcgtaaattagctgatgcttacaaaacagaaaatgaagaactgaaggccaagtgg
gaaggtgggaaagtagcacttgaggattttaagaataaagctgacaaggcatacaatgaa
ctcaatgaacagaataaaattctgcatgctaaacttgaggcattccacattcgattggcg
gagaaagatcaaaagttggctggagtttcttccgaacttaatactgagatggttggggat
tctggtatgcagagtgtggttagttacctcagacggacaaaagaaattgctgaagtagag
atctccttgctaaagaaggacaagttgagattgcagtcacaattagaaagtgctcttaaa
gctgtggagagtgcacaagcttcacttaatgctgagcgtcaaagctcaaaagcattattg
ttaaccgaggaggaaattaaatctttacaacttcaggttagggagatgaacttgcttcgt
gaaagcaatatccaactgcgagaagagaataagcacaattttgaggaatgccagaaacta
cgtgaagaatttagaaaggctaaatgtgaaacagagaactttgagagcatgctgaagatg
agacaagtggaggtggaagcctgcaaaatggaaattgaatcgcagaaagtggagaaggct
catcttgaaagcagagtctctgagttgcttgaaaaatctaagaatatagattatgaagat
tataatcgtgtgaaggatgatgttcaaagaatgcagatggagctgaatgagaaagatgca
gaaattgcaaaagtcaaaatgcttatcactgaaagacaggaatcgatatctcaattggag
caagacctttctagttgcagatttgaactgaaggaaagggaaaagaaactgaatgatatt
caacatattgaggccaatctgaggacagatatggagaaacagaagaaattcttttctcag
tttaagcggaagcttgaaattgtctcaaaggagaaggatgaattgggcaaagaaaatcaa
gctcttttgaggcagttggaagacattaaacaagtgaatattgtcgggaaaaggtccact
ggagattcaactggtgagcagaccatagaagaaaaggacactaaaattcagatacttgag
aaacatctggagcggctgagagaagaactaaaaagagagaaggaagatagtcgtacagag
aaaagcagacggttgaaaattgagaaggcaataaaggattcttatactatcgttgagcag
gaaaaatcaaagatcttaaatgatttggagaagcataagggaaacttgaagcaagcttct
gatgaacttgagaagcttagacaatctaaaagcaatctttcggaggatgctttacctcag
ccactttcagggattggcttggacgatcttgcttctacctacgttttagctgctgagaat
tttgagaagactgtgcagtcagttttgactgatcttggagctcagaatgctacttcagag
gtttctttggtcacagatgctttggtacaaagtagtacaggtcctgatgttcctctccaa
acgcctgatgttgcagtgcctgtggctcctgtaacaaccaactttcctgccaaagtccta
gaagaacgggaaaagaaaggtcaattatccaaggcaaaagtagaaacgcgtaaagcaggg
cgaaagttggttcgacctcgtcttggaaaaccaggagggtctctgggtgatatagacatg
tcaacatcagaattaccaaacagtgaaagcaagcgtgcaacttctggaaaatcagaaact
gaaagtgaatctactacatcagcccatcagctggctcgcaagcgtgtagcaacagcttct
gaattgcatgaacatgcagttatccctggggagagcattactgaaatggcagctcctgtc
atgaagaaggctaaagggtcagataccttggctgatgacgttggtggaccatcttctacc
tctctggaaagtctcaaaactcagtcgcccttggaagaagttcctgatgtttgtgagttt
cctcatggttcaagtgaggatgcagctgatgttgaaaaagaggttgaaattgcaggggag
aaggctgataggccaaaagaactatcatctgatggatctatcagccatgaggagatacac
actgacaggatggatgaaaatctggacaagcagattgtagcggtgtcagatgatgggtta
aaagatcaagctgaaccagacaactggcatctaacttcagagattggaagcgagagagag
gaaggtgaggtggcccctgaagttatggaactggagggtgccaataatgttgaaagcatt
gaaataggagacgatcatattgagccagttgcaactcctgatgcctccccatctagagtt
gatgatgatgcgatggctgtcacagacatggagattggcgagataaactcccctgagatt
caaaatgaagaaaagaatgatgagggtgatgcagctgatgaaacttccgaaattttagat
aagccaactgatagtaaccagattgatatggagagtgatcaggctgttgaaaccacctca
gtagctactgagaacgtttcgagtacaccgccagaaataaatgattcgaaacaaggtagc
cctattgttgcaaaacggtcgtctcctgtcggtagtagcacgtctactacaataaatttg
caagagcgagccaaggaaagagctatgctgagacaggctggagttgtttcttcattggat
agacgccctgtgagaggattgcgtggccggggtggtcggatagagcgaggtggccgtggt
caacgatctggacggggaccacctggggaatcaggtaggagttaa
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integrated database retrieval system
