Cucurbita pepo subsp. pepo (vegetable marrow): 111778891
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Entry
111778891 CDS
T05351
Name
(RefSeq) serine hydroxymethyltransferase 4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00260
Glycine, serine and threonine metabolism
cpep00460
Cyanoamino acid metabolism
cpep00630
Glyoxylate and dicarboxylate metabolism
cpep00670
One carbon pool by folate
cpep01100
Metabolic pathways
cpep01110
Biosynthesis of secondary metabolites
cpep01200
Carbon metabolism
cpep01230
Biosynthesis of amino acids
cpep01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
111778891
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
111778891
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
111778891
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
111778891
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
111778891
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Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
111778891
NCBI-ProteinID:
XP_023514660
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Position
LG17:complement(1848379..1851054)
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AA seq
471 aa
AA seq
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MDPVNAWGNTPLEAVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYEKLEEKALDF
RPKLIICGGSAYPRDWDYAKFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
VALKQAMAPGFKVYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV
EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAITITL
NIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSASFDMPGFLMSEMKYKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgtcaatgcatggggcaacactcctcttgaagctgtcgaccctgagatcttc
gatctaatcgagaaggagaagcgtcgacaatgccgtggaatcgagcttattgcctctgag
aatttcacttccttcgctgtcatcgaggccctcggtagcgccttgaccaacaaatactcc
gagggcatgccgggtaaccgatactatggtggcaacgagttcatcgacgagatcgagaat
ctctgccgttctagagccctccaggccttccatgtcgatcctgccaaatggggcgtaaat
gtccagccctactctggttctccggcgaatttcgctgcctacacggcgttgcttcagccg
catgaccgtattatggggctggatcttccttctggtggccatttgacgcatggttactac
acttccggtgggaagaagatctctgctacctcgatttacttcgagagtttgccttacaag
gttaattcctccactggatatattgattacgagaagttggaggagaaggctttggatttc
aggccgaagctgattatctgtggtggcagtgcataccctagggactgggattacgccaaa
ttcagagcaattgccgacaaatgtggtgcccttctgctttgtgatatggctcacattagt
ggtctcgttgctgctcaggaagctgcaaacccgttcgagtattgtgacgttgtcacgacc
acaactcacaagagtttgaggggtccgagggctggtatgatcttctataggaagggtcca
aagccaccaaagaagggtcagcctgaggatgctgtttatgacttcgaagacaagatcaac
ttctctgtcttccctgcccttcaaggtggccctcacaatcaccaaattggtgctttagct
gttgccttgaagcaggctatggcccccgggttcaaggtctatgcaaaacaagttaaggcc
aatgctgtagcccttggaaattacctgatgagcaagggctacaagcttgtcactggcgga
actgagaaccacctcgttctctgggatcttcgtcctctaggattgactggcaacaaggtt
gaaaagctttgcgacctgtgcaacattactgtaaacaagaacgccgtgttcggcgacagc
agtgcattggctcccggaggtgttcggatcggtgcacctgccatgacatcgagaggtttg
gtcgagaaagacttcgaacagatcgcagagttccttcaccgtgctataaccatcaccttg
aacatccagaaggaatatggaaagctgttgaaggacttcaacaagggtctggtaaacaac
aaggaaatcgaagagctcaaggccgacgttgagaaattctctgcctcattcgacatgccc
ggtttcctcatgtccgagatgaagtacaaggactag
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