Cucurbita pepo subsp. pepo (vegetable marrow): 111781231
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Entry
111781231 CDS
T05351
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00520
Amino sugar and nucleotide sugar metabolism
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
111781231
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
111781231
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
111781231
NCBI-ProteinID:
XP_023517479
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Position
LG19:complement(7582938..7585715)
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AA seq
721 aa
AA seq
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MTLSEKVAQLGHDAPGVARLGLPPYNWWSEALHGISNVGPGTRFDNVVPGATSFPNVINM
AASFNEAMWKTVGQVVSTEGRAMFNLGRSGLTFWSPTINVVRDPRWGRILETPGEDPFVV
GKYAVNYVRGLQDVEGTENATDLNSRPLKVSSCCKHFAGYDVDNWKGVHRYTFDARVTEQ
DMLETFLKPFEMCVKEGDVSSVMCSYNRVNGYPTCADPVLLKDTIRGDWDLHGYIVADCD
SVEVMVKYQHFLNDTNEDAVAQTLKAGLDLDCGVLSPKYAESSVRQGKVRVKNIDKALNY
LYVVLMRLGFFDGSPKFQSLGSKDICNEAHIELATEAARQGIVLLKNDNDTLPLDPSTIK
TLAVVGPHANATSVMLGNYAGVPCRMKSPIDGLSEYAKVNYQMGCEAVACKKHRFIPGAV
DAAKNSDATVIVVGLDLSIEAEGLDRDHLLLPGSQAELVGQVAAASKGPVVLVIMSAGGI
DISFAKNISNIKAIVWAGYPGEEGGRAIADVIFGKYNPGGRLPVTWHEADYVNQLPMTSM
PLRPVPSLKYPGRTYKFFDGPVVYPFGYGLSYTSFNHTLVSAIPSVTVNINKAILCRDIA
YDTAVKLDCASVLVDDITCSDEFEFEIKVENVGKKDGSQVVIVYSKPPSGISSTHIKQVV
GFQRVFLKAGGFQSVKLKLNACKSLGLIDFGGYNLLPAGEHTILVGDGAVSFPVKLSFNR
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacattgtcggagaaagttgctcaacttggccatgatgcccctggagtagcccgcctc
ggtttgccaccgtacaattggtggtcggaggctcttcatggcatctccaatgttggccct
ggtactcgatttgacaatgttgtacctggcgccactagcttccccaatgtcatcaacatg
gcagcatctttcaatgaagctatgtggaaaacagtcggtcaagtggtttcgaccgaagga
agagcaatgttcaatctagggaggtctggattgacattttggagtccaaccatcaatgta
gttcgggatccaagatgggggcgaatcttggaaacacctggtgaagacccttttgtggtt
ggcaaatatgcagtgaactatgttagaggtctccaagatgtggaaggaactgaaaatgct
accgatttgaactctaggcctctcaaggtttcttcttgttgcaagcattttgctggttat
gatgtcgacaactggaaaggtgtccatcgctacacgtttgatgctagggtgactgaacaa
gacatgttggagacattccttaagccatttgagatgtgtgttaaggaaggtgatgtcagc
agtgtgatgtgttcttacaacagagttaatggctatccaacttgtgctgatccagttctc
ttgaaggacaccattagaggcgattgggaccttcatggatacattgttgcagactgtgac
tcagttgaggttatggttaaatatcaacatttcctaaatgatacaaatgaagatgctgtt
gcccaaactctaaaagcagggttggatctggattgtggtgtactttccccaaaatacgca
gagagctcagtaaggcaagggaaagttagagtgaaaaacattgacaaagctctaaactat
ctctatgttgttctaatgagacttggattcttcgatggaagccccaagttccaatcgctt
ggaagcaaagatatttgcaatgaagcacacattgaattggccactgaagctgccagacaa
ggaattgttcttctcaagaatgataatgacactttgcctcttgatccttctactatcaaa
accctggctgttgttggaccccatgccaatgctacctctgtcatgcttggaaattatgca
ggagtgccatgccgaatgaaatctccaattgatgggctatcagaatatgcaaaagtgaac
taccaaatgggttgtgaggctgttgcttgcaaaaaacataggttcatacctggagccgta
gatgcggccaagaactccgatgcaactgtgattgttgtgggtcttgatttgtctattgaa
gctgagggcttggacagagatcatcttcttcttcctggttcccaagctgagctcgtcgga
caagttgcagctgcctctaagggccctgttgttcttgtcatcatgtcggccggtggcatc
gacatctcattcgctaaaaatatttccaacatcaaagccattgtctgggctggttatccc
ggcgaagagggcggccgcgccatcgccgatgttatctttggaaaatacaacccaggagga
agattaccggtgacatggcatgaagccgactacgtcaaccagctaccaatgacatcgatg
cctctccgcccagtgccaagcctcaaatatccaggaagaacctacaaattcttcgacggc
cctgtcgtctaccccttcggctacggcctcagctacacctctttcaaccatactctagtc
tccgccatcccatccgtgaccgtcaatatcaacaaagcaatcctatgccgagacattgcc
tacgacactgccgtaaagctagactgtgcctccgtcctcgtcgacgacataacttgctcc
gacgagttcgagttcgaaatcaaagtcgagaatgtcggcaaaaaggacggtagccaggtt
gtgatcgtgtactcgaaaccaccaagcggaatttcatcaactcatatcaagcaggtggtt
gggttccagagggtgtttttgaaggctgggggcttccaatcggtgaaattaaagttgaat
gcttgtaagagcttggggctaattgatttcggtggctacaatctgctgccggcgggtgag
cacaccattttggtgggagatggagcggtttctttccctgtgaagcttagcttcaatagg
atttaa
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