Cucurbita pepo subsp. pepo (vegetable marrow): 111799992
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Entry
111799992 CDS
T05351
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111799992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111799992
04147 Exosome [BR:
cpep04147
]
111799992
04090 CD molecules [BR:
cpep04090
]
111799992
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111799992
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111799992
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111799992
CD molecules [BR:
cpep04090
]
Proteins
111799992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA
AAA_5
nSTAND1
AAA_15
SbcC_Walker_B
AAA_30
AAA_25
APS_kinase
DUF815
Rad17
DUF87
Motif
Other DBs
NCBI-GeneID:
111799992
NCBI-ProteinID:
XP_023539322
LinkDB
All DBs
Position
LG08:8234056..8240270
Genome browser
AA seq
1364 aa
AA seq
DB search
MSQDSEEIKTTEQWKWSEMQGLELVSSDLPPPPPPPLDPFITNNPSAPTAKHTDPEDLRP
KEEAQDGFGRATNGDMESTSDSKKENGGGTSGEKPEAVTAVGFGELFRFADGLDYVLMAI
GSVGALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWA
EISCWMWTGERQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKL
GNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLTAKTQEALSEA
GNIVEQTIVQIRVVFAFVGESRALQRYSSALKISQRIGYKSGFSKGMGLGATYFVVFCCY
ALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKAKVAAAKIYRIID
HKPTLNRNNESGLELESVSGLVELKNVDFSYPSRPDVRILNNFSLTVPAGKTIALVGSSG
SGKSTVVSLIERFYDPMSGEVLLDGRDIKTLKLRWLRQQIGLVSQEPALFATTIKENILL
GRPDADQVEVEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPA
ILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIG
THDELIAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRS
PYSRRLSDFSTSDFSLSLDASLPNYRLEKLAFKEQASSFWRLVKMNSPEWLYALLGSVGS
VVCGFLSAFFAYVLSAVLSVYYNPDHAFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDI
VGENLTKRVREKMLTAVLKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQN
TSLMLVACTAGFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGE
AIANVRTVAAFNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGIAQFSLYASYALGLWY
ASWLVKHGLSDFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFALLDRKTEIE
PDDPDATPVPDKLRGEVELKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSS
VIALVQRFYEPSSGRVMIDGKDIRKFNLKSLRKHIAMVPQEPCLFAASIHDNIAYGHESA
TEAEIIEAATLANAHKFISALPEGYKTYVGERGVQLSGGQKQRIAIARALIRKAELILLD
EATSALDAESERSVQEALNRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHL
LKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSAKTREDDEKES
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattccgaggagataaagacgactgagcagtggaaatggtccgaaatgcaa
ggccttgagctcgtctcttctgatcttcctcctcctcctcctcctcctcttgacccgttt
ataaccaacaacccatcagccccaacagctaaacacacagaccctgaagacctcagaccc
aaagaggaggctcaagacggatttggcagagccacaaacggagatatggagtctactagt
gattccaagaaggaaaacggcggtggcaccagtggggagaagcctgaggctgtcaccgcc
gttgggtttggggagctcttcagattcgccgatgggttggattacgttttgatggcaatt
gggtcggtcggagcccttgtccatggttgttctctgcctctgtttcttcgattcttcgcc
gatcttgttaactcttttgggtcttacgccaatgatgtggataaaatgatgcaggaggtt
ttgaagtatgcattctactttctcgtggttggagctgcaatatgggcgtcatcctgggca
gagatttcgtgttggatgtggaccggcgagcggcaatccacaaagatgaggatcaagtac
ctagaagcagcactggaccaggacatccagtattttgataccgaggtgcgaacatctgat
gtcgttttcgccatcaacactgatgcagtgatggtccaagacgccattagtgagaagctg
ggcaacttcatccactatatggcaacatttgtttctggattcgttgtgggtttcactgcg
gtgtggcaattggctttagtaacccttgcggtggttcctctgattgctgtaatcggcggc
atctacaccaccacaatagcgaagctcactgccaagacccaggaggctctttcagaagct
ggaaatattgtcgaacagacaatagttcaaattcgagttgtctttgctttcgtcggcgaa
tcaagagcattacagaggtactcctccgcattgaagatttctcaaagaataggttacaag
agtgggttctccaagggtatgggattgggcgccacttactttgtcgtcttctgctgttac
gctcttctgctctggtacggaggttatcttgttagacaccatgccaccaatggcggtctc
gccattgccaccatgtttgcagtgatgattggcggactggcattggggcaatctgctccg
agcatgagttcattcgcaaaggctaaagttgcagctgctaaaatctaccgtataatcgac
cataagcccactctaaaccgcaacaacgaatctggtttggaattagagtcagtttcagga
ctggttgagctaaaaaacgtagatttctcatacccatcaagaccagatgtaagaatcctc
aacaatttctccctaactgtccctgccggaaagactatagctctggtcggtagcagtggc
tccggcaagagtaccgtcgtctccctcattgaaagattctatgaccccatgtcaggtgaa
gttctactagatgggcgtgacataaaaactttgaagctaagatggttaagacagcaaata
gggctggtgagccaagaacctgctctttttgccaccaccatcaaggaaaacattctcttg
ggcagacctgatgccgaccaagttgaggtcgaggaagctgctcgagtcgccaatgctcat
tcattcattatcaaacttcctgaaggctatgacactcaggtaggggaaagaggactgcag
ctgtctggagggcagaaacagaggattgcaatagcaagggcaatgctgaagaaccctgct
atcctactcttagatgaggcgacgagtgcattggactcggagtcagaaaagcttgtacag
gaggctctggatcgtttcatgattgggcggaccactcttgttattgcccatcgtctctct
accattcggaaggctgaccttgtggcagtactccaacaaggaagtgtttctgaaatagga
acacatgatgagctcattgctaaaggagagaatggtgtatatgctaagcttatccgaatg
caggagatggcacatgaaactgctctcaataatgccagaaagagtagtgcaaggccttca
agtgccaggaactcggtgagctcccccataattgcacggaattcttcctatggacgatcg
ccatattctcgtcggttatctgacttctccacatccgattttagcctctctctggatgct
tcacttcccaattacaggcttgaaaaacttgcctttaaggagcaggccagttccttttgg
cgtcttgtgaaaatgaattctcctgaatggctctatgcattacttggttctgttggctct
gttgtttgtgggtttttaagcgccttcttcgcatacgttctaagtgctgttctcagtgtc
tattataatccagaccatgctttcatgagcagagaaataataaagtactgctatctacta
atcggactttcatcagctgctcttctcttcaatacaatacagcatttcttctgggatatt
gtgggagagaatctcaccaaacgtgtaagagagaagatgcttacagcagtactgaaaaat
gaaatggcatggtttgaccaggaagaaaatgagagtgccaagattgctgcaaggctggcc
ctcgacgcgaacaacgtcagatcagctattggagataggatttctgtgattgtacagaac
acttcactgatgctagttgcatgcactgccggatttgttttgcagtggcgcctctctctt
gtccttgtagccgtcttccctgtggttgttgcggccactgtcttacagaaaatgttcatg
actggtttttcaggagaccttgaggccaaccatgccaaggccacacaactagcaggggag
gccattgccaatgtaaggactgtcgctgcattcaactcagaggaaaagattgtcagactt
ttctcaaccaaccttgagatcccactacgacgctgcttttggaagggacagattgccggt
agtggatttggcattgctcagttctctctttatgcttcctatgctctaggtctttggtat
gcctcatggcttgtgaagcatggcctctccgatttttcgaaggcaatccgtgttttcatg
gtccttatggtttctgcaaatggtgcagctgaaacactaactctggctcctgactttatt
aagggtggtcgagccatgcgttcggtctttgcacttcttgaccgcaaaaccgaaattgaa
cctgatgacccagatgccaccccagtcccagataaacttcgtggagaggttgaacttaaa
catgttgacttttcctatccaactcggcctgatatccctgtcttcagagacctaagtttg
cgtgcccgagcaggtaagactcttgctcttgttggccctagtgggtgtggcaagagttct
gttattgcactagtccaaagattctatgagccatcatcaggacgagttatgattgatgga
aaggacattcgtaagttcaatctcaagtccctgagaaagcacattgctatggtcccacag
gagccatgcttatttgctgcttccatacatgataacatagcttatggccacgaatcagct
accgaggctgagatcatagaagctgcaactttggcgaatgctcataagttcatttcagca
ttgccagaaggatataaaacttatgttggggagaggggagttcaactatctggtggacag
aaacaaagaatcgcaattgcccgtgctctaattaggaaggcagagctaatactactagat
gaggcaacaagtgcactcgatgctgaatccgagcgatccgttcaggaggccctaaacagg
gcctgttcaggaaaaacaacaatcgtagtcgctcatcgactatcaactatccgaaatgca
cacgtcattgcagtaatcgacgatggtaaggttgcagagcagggatcacactcacatttg
ttgaaaaattatccagatgggtgttatgcccggatgatacaattacaaagattcacacac
agccaagtgattggcatgacttcaggttcaacttcctcagcaaaaactagagaggatgat
gagaaagagagctag
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integrated database retrieval system
