Cucurbita pepo subsp. pepo (vegetable marrow): 111805833
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Entry
111805833 CDS
T05351
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111805833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111805833
03041 Spliceosome [BR:
cpep03041
]
111805833
03032 DNA replication proteins [BR:
cpep03032
]
111805833
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111805833
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111805833
U2 snRNP components
111805833
Complex B
U1 snRNP components
111805833
U4/U6.U5 tri-snRNP components
111805833
Complex C
U2 snRNP components
111805833
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111805833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111805833
NCBI-ProteinID:
XP_023546841
LinkDB
All DBs
Position
LG11:1149742..1152875
Genome browser
AA seq
87 aa
AA seq
DB search
MSIPVNPKPFLNNLTGKTVVVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQCTGSLG
EILIRCNNVLYLRGVPEDEEIEDAERD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcccagttaacccgaagccgtttttgaacaatttgactggaaagactgtggtc
gtgaaactcaagtgggggatggagtacaaaggctttcttgtctcggtggactcgtacatg
aacttacagcttgccaatactgaggaatatatcgacggacaatgtactgggagtttggga
gaaatattgatcaggtgtaacaacgttctttaccttcgcggagtaccagaggatgaagag
atagaagatgccgagcgtgactag
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