Clostridium perfringens ATCC 13124: CPF_2680
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Entry
CPF_2680 CDS
T00378
Symbol
truA2
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpf03016
]
CPF_2680 (truA2)
Enzymes [BR:
cpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CPF_2680 (truA2)
Transfer RNA biogenesis [BR:
cpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPF_2680 (truA2)
Prokaryotic type
CPF_2680 (truA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
ABG83136
UniProt:
A0A0H2YQK3
LinkDB
All DBs
Position
complement(2955640..2956374)
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AA seq
244 aa
AA seq
DB search
MRNIKLTIEYDGTSYFGWQKQPIGNTIQQKVEEAIKKVTKEEVEILGSSRTDSGVHAKAY
VANFKTNSNIPGKNFKAALNSKLPKDIVIMNSEEVAEDFHARYMTTGKTYCYTILNREEP
PALERNYVYHVKKQLDVESMKEACKYFLGKHDFKAFQRPGGTVKTSVRTITDIHIETEGN
KIKIYVSADGFLYNMVRLIVGTLLKVGRGKEKPEYIKEVIDSGDRKKAGICVPPTGLCLE
KVFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatataaaattaactatagaatatgatggaacatcttattttgggtggcaaaaa
cagcctataggaaatactattcagcagaaggtagaagaggctataaagaaggttactaaa
gaagaggtagaaatattaggaagtagtagaacagattcaggagtccatgctaaggcctat
gtggctaattttaaaactaattctaatataccaggaaaaaattttaaggctgcattaaat
tcaaaattaccaaaggatatagtaataatgaattcagaagaggtagctgaggattttcat
gctaggtatatgactacaggtaaaacttattgttacacaatactaaatagagaagagcca
ccagccttagaaagaaattatgtatatcatgttaaaaagcaattagatgttgaatctatg
aaagaagcatgtaaatactttttaggaaaacatgactttaaggcctttcaaagaccaggt
gggacagttaagacctctgtaagaacaataaccgatattcatattgaaacagaaggaaat
aaaattaaaatatatgtgtcagcagatggttttttatataatatggtaagattaattgta
ggaacattacttaaagtgggaagaggaaaagagaagccagaatatataaaggaagtcata
gattctggtgatagaaaaaaagctggaatttgtgttcctccaacaggattatgcttagaa
aaagttttttactaa
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