Clavibacter phaseoli: FGI33_02765 Help Entry FGI33_02765       CDS       T08435                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism cpha  Clavibacter phaseoli Pathway cpha03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cpha00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     FGI33_02765  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cpha03400]     FGI33_02765 Enzymes [BR:cpha01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      FGI33_02765 DNA repair and recombination proteins [BR:cpha03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      FGI33_02765 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C RNA_ligase DNA_primase_S Motif Other DBs NCBI-ProteinID:  UKF36072 LinkDB All DBs Position complement(599346..601865) Genome browser AA seq 839 aa AA seqDB search MAGAKQQVEVDGHRIALTNLDKVLYPTTGTTKGDVIAYYAAIAPHMLPHLRDRPVTRKRW VDGVGTDEQPGKMFFQKDLDAHTPEWVQRRAIQHRDHANDYPLVGDVATLTWLGQIAALE LHVPQWRFGRTGDVRRPDRLVLDLDPGPGAGLPECVEVAKAARAILRDMGLGPYPVTSGS KGIHLYAALDGSHDADAISEVAHELARALEADHPDLVVSDMRKALRQGKVLVDWSQNNPN KTTVAPYSLRGRSRPTVAVPRTWRELASPTLRHLELDEVIARMRRREDPLAPVEQGHRES LQPTRERLAGFARKEPSDDADAADDRLATYRSKRDAAKTSEPVPAESPAPSDGRSFVIQE HHARALHWDFRLEHDGVLVSWALPKGVPTEHGTNHLAVQTEDHPLEYGSFEGTIPVGEYG GGEVAIWDAGTFELEKWRDGKEVIATLHGRGEGTGIDGPRRYALIHTGGHGKADANWLIH LMEPADAPATAHAKPARPASLEKAGGRTRVGARRRGGAASAPAPMLATAATGAGLDPDEE WAVEMKWDGCRAIAVVADGRATITSRNGVDLTPAFPELAELPDQLAVDAAVLDGEIVVLG SGGRPDFGLLQTRLGLTGEKDVARARKAAPVHLMLFDALAIGDRVLVDEPYRERRAALLD AVRSPGRGRIQVPPAFDGDLDGALATSRELGLEGVVAKRVDAPYESGRRSSAWIKVKHHR AQEVVVGGWRPGSGSRASGIGSLLVGVPGPDGLEYAGRVGTGFTERDLDDALRRFRPLAR KTSPFADVPAADARDAHWITPRLVGEVEFAEWTSTGRLRQASWRGWRHDKSPDEVVREG NT seq 2520 nt NT seq  +upstreamnt  +downstreamnt atggcgggggcgaagcagcaggtcgaggtcgacgggcaccggatcgcgctcacgaacctc gacaaggtgctgtacccgacgaccgggacgaccaagggcgacgtcatcgcctactacgcc gccatcgcgccgcacatgctgccccacctccgcgaccggcccgtcacccgcaagcgctgg gtcgacggcgtcggcaccgacgagcagccggggaagatgttcttccagaaggacctcgac gcgcacacgcccgagtgggtgcagcggcgggcgatccagcacagggaccacgcgaacgac taccccctcgtcggcgacgtggcgacgctcacgtggctcgggcagatcgcggcgctcgag ctgcacgtgccgcagtggcgcttcggccgcacgggcgacgtgcgccgccccgaccggctc gtgctggacctcgatcccggcccgggcgccggcctccccgagtgcgtcgaggtcgcgaag gcggcccgggcgatcctccgcgacatgggcctcgggccgtacccggtgacgagcggatcc aagggcatccacctctacgccgccctcgacggcagccacgatgcggacgcgatctccgag gtcgcccacgagctcgcccgcgcgctcgaggccgaccacccggacctcgtcgtgagcgac atgcggaaggcgctgcggcagggaaaggtgctcgtcgactggagccagaacaaccccaac aagaccacggtcgcgccgtactcgctgcgcgggcgctcccggccgacggtcgcggtgccg cggacgtggcgcgagctcgcgtcgccgaccctccggcacctggagctggacgaggtcatc gcgcggatgcggaggcgcgaggatccgctcgcccccgtcgagcagggccaccgcgagagc ctccagccgacccgtgagcggctcgcgggcttcgcgcggaaggagccgtccgacgacgcg gacgccgccgacgaccggctcgcgacctaccgctccaagcgcgacgccgcgaagacgagc gagcccgtgccggcggagtcgcccgcgccgtccgatggccgctccttcgtgatccaggag caccacgcccgcgcgctgcactgggacttccggctggagcacgacggcgtgctcgtcagc tgggccctccccaagggcgtgcccaccgagcacggcacgaaccacctcgcggtgcagacg gaggaccacccgctcgagtacgggtccttcgagggcacgatcccggtgggcgagtacggc ggcggcgaggtcgccatctgggacgcgggcaccttcgagctggagaagtggcgcgacggg aaggaggtcatcgcgacgctgcacgggcggggcgagggcaccggcatcgacgggccgcga cggtacgcgctcatccacacgggcgggcacgggaaggccgacgcgaactggctgatccac ctgatggagcccgcggacgcgcccgcgacagcgcacgcgaagccggcgcgcccggcgtcg ctcgagaaggcgggcggccgcacgcgcgtcggcgcccgccgccgcggcggcgccgcatcc gcccccgcgcccatgctcgcgaccgccgcgaccggcgccggcctcgaccccgacgaggag tgggccgtcgagatgaagtgggacggctgtcgcgcgatcgccgtcgtcgcggacggccgc gcgaccatcacgagccgcaacggcgtcgacctcacgcccgccttccccgagctcgccgag ctacccgaccagctcgccgtcgacgccgcggtgctcgacggcgagatcgtggtcctcgga tccggcggccgccccgacttcggcctcctgcagacgcgcctcggcctgacgggcgagaag gacgtcgcgcgcgcccgcaaggccgcgcccgtgcacctcatgctcttcgacgcgctggcc atcggcgaccgcgtgctcgtcgacgagccgtaccgggagcgtcgcgccgccctcctcgac gccgtgcggtcgccgggccgcggccggatccaggtcccgcccgccttcgacggcgacctc gacggggcgctcgccaccagccgggagctcggcctcgagggcgtcgtcgccaagcgcgtc gacgcgccctacgagtcggggcggcggtcgagcgcctggatcaaggtcaagcaccaccgc gcgcaggaggtcgtggtcggcggctggcggcccggatccggcagccgggcatccggcatc ggctcgctgctcgtcggcgtccccggtcccgacggcctggagtacgcgggccgcgtcggc acgggcttcaccgagcgcgacctcgacgacgccctccgccggttccgcccgctcgcgcgg aagacgagcccgttcgccgacgtgccggcggcggacgcccgcgacgcgcactggatcacg ccccgactcgtcggcgaggtcgagttcgccgagtggacctcgaccggacgcctccgccag gcgtcgtggcgcggctggcggcacgacaagtcgcccgacgaggtcgtccgcgagggctga

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