Clavibacter phaseoli: FGI33_02770
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Entry
FGI33_02770 CDS
T08435
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FGI33_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_02770
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FGI33_02770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
DUF5321
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
UKF36073
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All DBs
Position
601902..602951
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AA seq
349 aa
AA seq
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MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEEKSREIDVVEFVPSDQVDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFGDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDDD
EEDAGGEVLDLMDALKRSIERSRGGASGATGKAAPAKRTAAKEKASGAEGSTATKGAAKK
STAKSSSAESTTEKKASAKKSTTKKASAKKATTKKGGAAKDPAAERKSA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtc
tacagcgcgacgcaggaccacgacgtgccgctgcaccaggtccacgacgccgacggcggg
cggatccgctaccagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcccacata
gacaaggcgttcgacgacggcgaccgcaccgtggtgatcaccgaggaggacctctcgagc
ctccccgaggagaagagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccaggtc
gaccccgtgatgctcgaccgcagctacttcctcgagcccgactcctcgagccccaagtcg
tacgcgctgctgcgccggacgctccaggagacggaccgcaccgcgatcgtccacgtgacc
ctccgccagcgcacccggctcgcggcgctccgcgtgcgcggcgacgtgctcatgctgcag
acgctgctctgggacgacgaggtgcgcgaggccgacttcccgtcgctcgacgccgcgccc
aaggtgtcaccgcgggagctgaagatgtcggcgcagctcgtcgaggggttcgcggaggac
ttcgacccgtcgaagttcggcgacgagtaccaggagcagctcaagaccctcatcgacgcg
aagctcgcgcagggcgactcgctcgacaccgacgcgaccttcggcgagggcgacgacgac
gaggaggacgcgggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatcgag
cggagccggggcggggcatccggggcgacggggaaggcggcgccggcgaagaggacggcc
gccaaggagaaggcgagcggggccgaggggagcaccgcgacgaagggcgccgcgaagaag
tcgacggcgaagtcctcgagcgcggagtcgacgaccgagaagaaggcgagcgcgaagaag
tcgacgacgaagaaggcgagcgcgaagaaggccaccacgaagaagggcggcgccgcgaag
gatccggcagccgagaggaagagcgcctag
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