KEGG   Clavibacter phaseoli: FGI33_02770
Entry
FGI33_02770       CDS       T08435                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
cpha  Clavibacter phaseoli
Pathway
cpha03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cpha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FGI33_02770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpha03400]
    FGI33_02770
DNA repair and recombination proteins [BR:cpha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FGI33_02770
SSDB
Motif
Pfam: Ku HC2 DUF5321 TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: UKF36073
LinkDB
Position
601902..602951
AA seq 349 aa
MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEEKSREIDVVEFVPSDQVDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFGDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDDD
EEDAGGEVLDLMDALKRSIERSRGGASGATGKAAPAKRTAAKEKASGAEGSTATKGAAKK
STAKSSSAESTTEKKASAKKSTTKKASAKKATTKKGGAAKDPAAERKSA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtc
tacagcgcgacgcaggaccacgacgtgccgctgcaccaggtccacgacgccgacggcggg
cggatccgctaccagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcccacata
gacaaggcgttcgacgacggcgaccgcaccgtggtgatcaccgaggaggacctctcgagc
ctccccgaggagaagagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccaggtc
gaccccgtgatgctcgaccgcagctacttcctcgagcccgactcctcgagccccaagtcg
tacgcgctgctgcgccggacgctccaggagacggaccgcaccgcgatcgtccacgtgacc
ctccgccagcgcacccggctcgcggcgctccgcgtgcgcggcgacgtgctcatgctgcag
acgctgctctgggacgacgaggtgcgcgaggccgacttcccgtcgctcgacgccgcgccc
aaggtgtcaccgcgggagctgaagatgtcggcgcagctcgtcgaggggttcgcggaggac
ttcgacccgtcgaagttcggcgacgagtaccaggagcagctcaagaccctcatcgacgcg
aagctcgcgcagggcgactcgctcgacaccgacgcgaccttcggcgagggcgacgacgac
gaggaggacgcgggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatcgag
cggagccggggcggggcatccggggcgacggggaaggcggcgccggcgaagaggacggcc
gccaaggagaaggcgagcggggccgaggggagcaccgcgacgaagggcgccgcgaagaag
tcgacggcgaagtcctcgagcgcggagtcgacgaccgagaagaaggcgagcgcgaagaag
tcgacgacgaagaaggcgagcgcgaagaaggccaccacgaagaagggcggcgccgcgaag
gatccggcagccgagaggaagagcgcctag

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