Cnuibacter physcomitrellae: B5808_04860
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Entry
B5808_04860 CDS
T04797
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5808_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cphy03021
]
B5808_04860
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_04860
Enzymes [BR:
cphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5808_04860
Transcription machinery [BR:
cphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5808_04860
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5808_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARJ04629
UniProt:
A0A1X9LNC8
LinkDB
All DBs
Position
1038406..1039395
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSEHDEPITAYLRKHASGEVTAADISAPAGVEIHN
PDLVIATLNDKAKFELELIIERGRGYVSATQNRSEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAITPRDAIASAGRTLVELFGLARELNTAAEGIEIGPAPVD
AVLSSELSVPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDSVPGFDGAHFYGGYDDENV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctcaccgaggagaacatctcggagttccgctcgcgc
ttcgtcatcgagccgctcgagcccggcttcggctacaccctcggcaactcgctccgtcgc
accctcctgtcgtcgatccccggcgccgccgtgacgagcatccgcatcgacggcgtgctc
cacgagttctcgacgatccccggtgtcaaggaggacgtcaccgagatcatcctgaacatc
aagcagctggtggtctcgagcgagcacgacgagcccatcaccgcctacctgcgcaagcac
gcgtcgggtgaggtcaccgcggccgacatctcggctccggcgggcgtggagatccacaac
cccgacctcgtgatcgcgaccctcaacgacaaggccaagttcgagctcgagctcatcatc
gagcgcggccgcggctacgtgtcggccacccagaaccgcagcgagttctccgaggcgggc
cagatcccgatcgactcgatctactcgcccgtcctcaaggtgacctaccgcgtcgaggcg
acccgtgccggtgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagaccaagccg
gccatcacgccgcgcgacgcgatcgcctcggcgggtcgcacgctcgtcgagctgttcggt
ctcgcccgcgagctcaacaccgcggccgagggcatcgagatcggccccgcgccggtcgac
gccgtgctctccagcgagctgtcggtgccgatcgaggacctcgacctctcggtccgctcc
tacaactgcctcaagcgcgagggcatcaacacggtctccgagctggtcgccctctccgag
acgcagctgatgaacatccgcaacttcggtcagaagtcggtcgacgaggtgaaggacaag
ctcgtcgagctcggcctgtcgctgaaggacagcgtgcccggcttcgacggcgcgcacttc
tacggcggatacgacgacgagaacgtctga
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