Cnuibacter physcomitrellae: B5808_07995
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Entry
B5808_07995 CDS
T04797
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cphy
Cnuibacter physcomitrellae
Pathway
cphy03030
DNA replication
cphy03430
Mismatch repair
cphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5808_07995
03430 Mismatch repair
B5808_07995
03440 Homologous recombination
B5808_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cphy03032
]
B5808_07995
03400 DNA repair and recombination proteins [BR:
cphy03400
]
B5808_07995
Enzymes [BR:
cphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5808_07995
DNA replication proteins [BR:
cphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5808_07995
DNA repair and recombination proteins [BR:
cphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5808_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF5487
HROB
Motif
Other DBs
NCBI-ProteinID:
ARJ05154
UniProt:
A0A1X9LIZ1
LinkDB
All DBs
Position
1691005..1694550
Genome browser
AA seq
1181 aa
AA seq
DB search
MRPTTRAGDHVPSSTDSFVHLHVHSEYSMLDGAARVKPLIQAAVEQGMPAVAVTDHGNMF
GAFDFWKTATEAGIKPIIGTEAYLTPGTHRTDKTRVRWGNGGGDDVSGAGAYTHMTLLSA
STEGMHNLFRLSSLASIEGYYFKPRMDRELLSQYGKGIIATTGCPSGEIQTRLRLGQYEE
AKKAAAEFRDIFGKENFFCEIMDHGLEIERRIMTDLIRLAKELDLPLVATNDLHYTHAHD
AKSHAALLCVQSGSTLSDPNRFKFDADEFYLKTPAEMRSLFRDYPEACDNTLLIAERCDV
KFDTSANYMPRFPVPEGETEASWFDKEVEKGLLERYPDGVTDAVRKQADYEKGVITQMGF
PGYFLVVADFINWSKRNGIRVGPGRGSGAGSMAAYAMKITDLDPLQHGLIFERFLNPDRV
SMPDFDVDFDERRRGEVIKYVTEKYGEERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGE
KLTKAMPPAIMGKDIPLSGIVDKEHPRYKEAGDVRAILETDPEARTVFDTALGIENLKRQ
WGVHAAGVIMSSDPLIDIIPIMKREQDGQIVTQFDYPAAESLGLIKMDFLGLRNLTIIDD
ALDNIESNRGFRPVLEDLSLDDEKAYELLSRGDTLGVFQLDGGPMRSLLRLMKPDNFEDI
SAVIALYRPGPMGANSHTNYALRKNGLQEITPIHPELEEPLKDILDTSYGLIIYQEQVMA
IAQRVAGFSLGQADILRRAMGKKKKSELDKQYEGFSGGMIANGFSEEAIKMLWDILLPFS
DYAFNKAHSAAYGVLSYWTAYLKAHYPAEYMAALLTSVGDAKDKLAMYLNECRRMGIKVL
PPDVNSSIGFFAAVGADIRFGLGAVRNVGTNVVASIREAREQKGAFESFGDFLKKLPLTA
LNKRTVESLIKAGAFDSLGATRRALIEVHEGMIDAAVGEKRAEANGQVGFDFADLWDEPQ
AEHAIPERPEWAKRDKLAFEREMLGLYVSDHPLAGLELELAKQASTSILDLLESEHTQDG
DQVTVAGLITSVQHRVARNSGNQYGMIQIEDFAGEITAMFMGKAYQEFGPALTADTIVVV
RGRVSMRDDGMNLHAYSLFQPNLGERGSSGPLQISMSEARATTETVQALGDVLIRHAGDT
EVRLKLVKADNVRVFEVPYPVSVTADLFGELKSLLGPHCLT
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgacaacacgagccggagatcacgtgccttcgtcgaccgattcctttgtgcat
ctgcacgtccacagcgagtactcgatgctcgatggagcggctcgcgtcaaacccctgatc
caggccgccgtcgagcagggcatgcccgccgtcgccgtcaccgaccacggcaacatgttc
ggcgccttcgacttctggaagacggcgaccgaggccggcatcaagcccatcatcggcacc
gaggcctacctcacaccgggcacgcaccggaccgacaagacgcgtgtgcgctggggcaac
ggcgggggagacgacgtctccggcgccggcgcgtacacgcacatgacgctcctctcggcg
agcaccgaggggatgcacaacctcttccgcctgtcgtcgctggcgtcgatcgagggctac
tacttcaagccgcgcatggaccgcgagctgctctcccagtacggcaaggggatcatcgcg
accacggggtgcccctccggcgagatccagacgaggctccgtctcgggcagtacgaggag
gcgaagaaggccgcggcggagttccgcgacatcttcggcaaggagaacttcttctgcgag
atcatggatcacggcctcgagatcgagcgccggatcatgaccgacctcatccggctggcc
aaggagctcgacctcccgctcgtggccacgaacgacctccactacacgcacgctcacgac
gccaagagccacgcggcactgctctgcgtgcagtccgggtcgaccctctccgacccgaac
cgcttcaagttcgacgccgacgagttctacctgaagaccccggccgagatgcgctcgctg
ttccgcgactacccggaggcgtgcgacaacaccctcctcatcgccgagcgctgcgacgtg
aagttcgacaccagcgccaactacatgccgcggttccccgtccccgagggcgagaccgag
gcgtcgtggttcgacaaggaggtcgagaagggcctcctcgagcgctaccccgacggcgtg
accgacgcggtccgcaagcaggcggactacgagaagggtgtcatcacccagatggggttc
ccgggctacttcctcgtggtggccgacttcatcaactggtccaagcgcaacggcatccgc
gtcggcccgggccgtggctccggcgccggctccatggcggcgtatgccatgaagatcacc
gatctcgatccgctccagcacggcctcatcttcgagcggttcctcaaccccgaccgcgtc
tccatgcccgacttcgacgtcgacttcgacgagcgtcgtcgcggtgaggtgatcaagtac
gtcaccgagaagtacggcgaggagcgcgtcgcccagatcgtcacctacggcacgatcaag
gccaagcaggcgctgaaggactcgtcccgcgtgctgggcttccccttcggcatgggggag
aagctgaccaaggcgatgccgcccgcgatcatgggcaaggacatcccgctgtccgggatc
gtcgacaaggagcacccgcgctacaaggaggcgggcgacgtccgcgccatcctcgagacc
gacccggaggcgcggacggtcttcgacaccgcgctcggcatcgagaacctcaagcggcag
tggggcgtccacgcggcgggcgtcatcatgtccagcgacccgctgatcgacatcatcccg
atcatgaagcgggagcaggacggccagatcgtcacccagttcgactatccggccgcggag
tccctcggcctgatcaagatggacttcctggggctgcggaacctgacgatcatcgacgac
gcgctcgacaacatcgagtcgaaccgcggcttccgaccggtgctggaagacctctcgctc
gacgacgagaaggcctacgagctcctctcccgcggcgacacgctcggagtgttccagctc
gacggcgggcccatgcgatcgctgctgcgcctgatgaagcccgacaacttcgaggacatc
tccgcggtcatcgccctctaccgtccgggccccatgggcgcgaactcgcacacgaactac
gcgctgcgcaagaacggcctccaggagatcacgccgatccaccccgagctcgaggagccg
ctgaaggacatcctcgacaccagctacggcctcatcatctaccaggagcaggtgatggcg
atcgcgcagcgggtcgccggcttctccctcggacaggccgacatcctccgccgcgcgatg
ggcaagaagaagaagtccgagctcgacaagcagtacgagggcttctccggcgggatgatc
gcgaacgggttctccgaagaggcgatcaagatgctgtgggacatcctgctgcccttctcc
gactacgccttcaacaaggcccactcggccgcctacggcgtgctctcgtactggacggcg
tacctcaaggcccactacccggccgagtacatggccgccctcctcaccagcgtgggcgat
gccaaggacaagctcgccatgtacctcaacgagtgccgtcggatggggatcaaggtcctc
ccgcccgacgtcaactcctccatcggcttcttcgccgccgtcggggccgacatccgcttc
ggcctcggagccgtgcgcaacgtcgggacgaacgtggtcgcgtccatccgcgaggcccgc
gagcagaagggcgcgttcgagtcgttcggtgacttcctgaagaagctgccgctgaccgcc
ctcaacaagcggacggtggaatcgctcatcaaggccggggcgttcgactccctcggcgcc
acgcggcgtgcgctcatcgaggtgcacgagggcatgatcgacgccgcggtgggggagaag
cgtgccgaggcgaacggccaggtcggcttcgacttcgccgacctgtgggacgagccgcag
gccgagcacgccatccccgagcggccggagtgggccaagcgcgacaagctggcgttcgag
cgcgagatgctggggctctacgtctccgaccatccgctcgcgggtctcgagctcgagctg
gcgaagcaggcgtcgacctcgatccttgacctgctcgagagcgagcacacccaggacgga
gaccaggtcaccgtcgccggcctcatcacgagcgtgcagcaccgcgtggctcgcaacagc
ggcaaccagtacggcatgatccagatcgaggacttcgcgggcgagatcaccgcgatgttc
atgggcaaggcctaccaggagttcggccccgcgctcaccgccgacaccatcgtggtcgtg
cgcggtcgggtgagcatgcgcgacgacggcatgaacctccacgcctacagcctgttccag
ccgaacctcggggagcgcgggtcgagcggtccgctgcagatctcgatgtcggaggcgcgg
gcgacgacggagaccgtgcaagcgctcggcgacgtcctcatccgccacgccggcgacacc
gaggtgaggctgaaactcgtgaaggccgacaacgtccgcgtgttcgaggtcccctatccg
gtgtcggtgaccgccgacctcttcggcgagctcaagtcgctcctcggcccccactgcctc
acctga
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