Chrysemys picta (western painted turtle): 101950488
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Entry
101950488 CDS
T04662
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03265
Virion - Ebolavirus and Lyssavirus
cpic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
101950488 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101950488 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101950488 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpic04515
]
101950488 (NCAM1)
04090 CD molecules [BR:
cpic04090
]
101950488 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
cpic00536
]
101950488 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpic00537
]
101950488 (NCAM1)
Membrane trafficking [BR:
cpic04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
101950488 (NCAM1)
Cell adhesion molecules [BR:
cpic04515
]
Immunoglobulin superfamily
NCAM1/2
101950488 (NCAM1)
CD molecules [BR:
cpic04090
]
Proteins
101950488 (NCAM1)
Glycosaminoglycan binding proteins [BR:
cpic00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
101950488 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpic00537
]
Others
101950488 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Ig_6
C1-set
V-set_CD47
Pur_ac_phosph_N
DUF3149
Motif
Other DBs
NCBI-GeneID:
101950488
NCBI-ProteinID:
XP_005291409
LinkDB
All DBs
Position
13:complement(5826252..6084997)
Genome browser
AA seq
1151 aa
AA seq
DB search
MLHTKDLIWTLFFLGAAVSLQVDIVPSQVEISVGESKFFLCQVTGEAKAKDISWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYSANIDDAGIYKCVVTSEEEGDSEATVNVKIFQKLMF
RNAPTPQEFQEGEDAVIVCDVLSSLPPTIMWKHKDRDVVLKKDVRFIVLPNNFLQIRGIK
KTDEGTYRCEGRILARGEVNFKDIQVIVNVPPSVRARQNTMNATANLSQSVTLVCDADGF
PEPAMSWMKDGDLIERGDDDEKYDFNYDGSELTIKKVEKSDEAEYTCMAENKAGEQDAII
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPE
KQETLDGRIVVRSHARVSSLTLKDIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPI
LKYKAEWRALGEEDWHSRWYDAKEANMEGMITIMGLKPETTYAIRLSAINGKGLGEISAV
SQFKTQPVRIPHSPTTVAPPAHFADTTLPPTRSESTEQMKGEPSAPKLEGQIGEDGNSIK
VNLIKQDDGGSPIRHYLIKYKAKLSSDWKPEIRLPSGSDHVILKSLEWNAEYEVYVIAEN
QQGKSKPAHYAFRTSAQPTVIPASTSPTSGLGTAAIVGILIVIFVLLLVAVDITCYFLNK
CGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTE
PNETTPLTEPEHPADTTATVEDMLPSVTTGTTNSDTITETFATAQNSPTSETTTLTSSIA
LPATAIPDSNSVPPSQATPAKGAATSASSPLSSSAPKVAPLVDLSDTPTSTPATSNLSSS
VLANQGAVLSPSTATSMAEASKAPAGSKPSAPAPANPASPPASSEPKQEVTSTKSPEKEA
VQPSMVKSPTETAKNPTNLKSEAASGSTTNPSQNEDFKMDEGTFKTPDIDLAKDVFAALG
TTAPASVASGQARELAASTVDSSVPLAPAKTEKTPVEEKSEVQATEPKTPPAEVKTVPNE
ATQTNENESKA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatactaaggatctcatctggactctgtttttccttggagctgcagtgtctcta
caagtggatattgttccaagtcaggtggagatcagcgttggagaatccaaattcttctta
tgtcaagtgactggggaagccaaagccaaagacatttcctggttctcccccaacggcgag
aagctgacgcccaaccagcagcgcatctcggtggtgcggaacgatgacttctcctccacc
ctcaccatttacagcgccaacatcgacgacgccggcatctacaagtgtgttgtcaccagt
gaggaggagggcgactctgaggccaccgtcaatgtgaaaatcttccagaagctgatgttc
aggaatgctcccacccctcaggagttccaggagggggaagatgcggtgattgtgtgtgat
gtgctcagctcgctgcctcccaccattatgtggaagcataaggacagggacgttgtcctg
aaaaaagatgtccgatttatagtcttgcccaacaacttcctgcaaatccggggaatcaag
aaaactgatgaggggacgtaccgctgtgagggcagaatcctggctcgtggggaggtcaat
ttcaaggatattcaggtcatcgtgaatgtgcctccttctgtccgtgccaggcagaacacc
atgaatgctacggccaatctcagccagtctgtcaccttagtgtgcgatgctgatggcttt
cctgagccagccatgagctggatgaaggacggggacttgatagaacggggggacgatgac
gagaaatacgacttcaactacgatggctctgagctgaccatcaagaaggtagagaagagc
gacgaggcggagtacacctgcatggctgagaacaaggctggagagcaggatgccatcatc
cacctcaaagtctttgcaaaacccaaaatcacttacgtggagaacaaaactgccatggaa
ctggaggaccagatcacactgacctgcgaggcttccggggacccaatcccctccatcacc
tggagaacctccacccggaacatcagcaatgaagagaaggcttcgtggactcggcccgag
aagcaagagaccctggatgggcgcatagtggtgcgcagccacgcccgagtgtcctccctg
acgctcaaagacattcagtacacggacgctggagaatatgtgtgcacggccagcaacacc
atcgggcaagactcccaggccatgtaccttgaagtacaatatgcccccaagctgcagggc
cctgtggcagtctacacctgggaggggaatcaagtgaacatcacatgcgaggtgtttgct
tatcccagtgctgtcatctcctggttccgggatggacagctgctaccaagctccaactac
agtaacatcaagatctacaacaccccatcagccagttacctggaggtgacgccggattcc
gagaatgactttgggaactataactgcaccgcagtgaatcgcatcggccaggagtcctct
gaattcatccttgtgcaagcggatactccgtcctctccttccattgacagagtggagcct
tactccagcactgcccaggtggagttcgatgagcccgaggccaccggtggggtgcccatc
ctcaagtacaaggcggaatggagagcactgggcgaggaggattggcattccaggtggtat
gatgccaaagaagcaaacatggagggcatgattaccatcatgggcctgaagccagagacg
acctatgccatcagactgtcagccatcaacggcaagggcctgggagagatcagtgcagtg
tctcagttcaagacccagccagttcgcattcctcattcaccaactactgttgccccgccc
gcccatttcgcagacacaaccctgcctcctaccagatccgaaagcacagagcagatgaaa
ggggaacccagcgcacccaaactggagggccagattggagaagacgggaactccattaaa
gtgaaccttatcaagcaggatgatggaggctccccgatcagacactatctgatcaaatac
aaagctaagctttcctcagactggaaaccagagatcagactcccctctggcagcgaccac
gtcattcttaagtccctagagtggaatgcagagtatgaggtctacgtgatagctgagaac
cagcaagggaaatccaaacctgcacactatgctttcaggacttcagctcagcctactgta
atcccagccagcaccagccccacgtcaggcctagggactgctgccatcgtgggcatcctc
atcgtcatctttgtgctgctcctggtggccgtggacatcacctgctacttcctgaacaag
tgcggcctgctgatgtgcatcgcggtcaacctgtgcggcaagtccgggcccggggccaag
ggcaaagacatggaggagggcaaagctgccttctcaaaagacgagtcgaaggagcccatc
gtggaggtacggactgaggaggagcggaccccaaaccacgacgggggcaaacacacagag
cccaacgagaccacgccgctgacggagcctgagcacccagctgacactacagctacggtg
gaggacatgctgccttctgtaaccacgggcaccactaattctgacactatcaccgaaacc
tttgccactgctcagaacagcccgaccagcgagaccaccaccctgacttccagtattgcc
ctgcctgccacagctatccctgactcaaactccgtgccgcccagccaggccactccggcc
aaaggggcagccacctcggcttcctcgccactgtcctcctcggcccccaaagtcgccccc
ctggttgacctcagcgacaccccaacttctactccggccactagtaatttgtcttcgagt
gtcctggccaatcaaggggcggtactcagccccagcacggccaccagcatggctgaggcc
tcaaaggcaccagctggtagcaagccgtctgccccagcccctgcaaaccccgctagccct
ccagcttcttcagagcccaagcaggaggtgacaagcaccaaaagcccagaaaaggaagct
gtacagcccagcatggtgaagagtccaacagaaacggccaagaacccaactaacctgaag
agcgaggctgcctcaggcagcaccacaaacccctcccagaacgaggactttaaaatggac
gaagggaccttcaagaccccagacattgaccttgcaaaggatgtttttgcagcgcttggc
actactgctccggccagtgtggctagtgggcaagctcgcgagcttgctgcttccactgta
gacagctctgtaccgctggcaccggcaaagaccgagaaaacccctgtagaagaaaaatct
gaggtgcaagcaacggaaccgaagacacctccagcagaagtcaagacggtccccaacgaa
gccacacaaacaaatgaaaatgagagcaaagcatga
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