Chiloscyllium plagiosum (whitespotted bambooshark): 122545642
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Entry
122545642 CDS
T08871
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122545642 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122545642 (lama4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_EGF
Laminin_II
Laminin_I
Laminin_G_3
VPS51_Exo84_N
BORCS6
Motif
Other DBs
NCBI-GeneID:
122545642
NCBI-ProteinID:
XP_043540537
LinkDB
All DBs
Position
3:complement(74938719..75131507)
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AA seq
1907 aa
AA seq
DB search
MAWISPWLCAFSLTALGLFYPATGSGESSGLSISAEDNIMGKSTNLGAIHPRGRQNLYSE
NCATGFYGTTDGACLPCNCHGHSEQCLDDSGICINCQNNTTGDHCEKCLDGYIGDVVQGH
HKSCQPCPCPMSIPSNNFAVSCKIKADKLHCFCQENYAGSRCERCAPGYYGTPMLYGSSC
RKCNCNGNSDPNLIFEDCNEETGHCRNCLRNTTGIHCERCAPGYYGDAVTAKNCTDCPCQ
KCGTDECDHATGQCRCKPGVSGAFCDRCEIGYHGYSSCSGCLRCECALASKDEYCDPLSG
RCRCLPGVTGKRCDRCLYGFWNYGRNGCQRCNCEGQCDSETGECLSAPTESPTDCSVVRC
DKCVWDLIEDLKLSGASLGEARLSVLNVITGDAINNRLQEFNITAIHFNMQIADMLSQSE
SKKLQTEDIEAAMVDLIADLNMLSEKENITISNAQLFDKETAKISDRANQINGQINNIAD
LVQDIIEGLNKYGIEEELSAEEISESFHEANQMLDELRNRNFSNQKPLTEEERTQARNLL
NRVHGFYNKLMEANSSIRKIQENITKYNNDVLDLKEALEDAIKTVQETEEKNEENINGYK
RKERLQKVLNKHFAAVNVTLITASNGLIDTEIAISELENKIVNLSTFHASIDGAQNLLRD
KLTNLSTYDKPLVLRAIDYAEQLRKLASELANILKSIDANGIVQKAINASNVYDNIVQYV
AEAEENATTLLNAAQRAEDAVEGIQTQSTWLRNSSEALLKKVRELDATMKDNDKTTFQDT
RRHVDAVIGKKNYTVNRLQNAVNQLALIEPSNKNRFNQSKLIAEEAKDTAEMVLQAVNDM
DEFLKGWPQNISASAEDGTAFKKTVSSAGDSVKNLTEIVPKLLDKLRIVEQKKPASNISA
SILRIRELIAQTRNVASKVQVSMKFDGRSAVELQPKANLEELKSFTSLSLFMRVPSLSEQ
AQGANKDRFIMYLGNKSGKQDYIGLCIKNDNLVYVHNLGNGDVEIPLNSKPVSTWPNYFN
LIKVERVGRHGKIQLTVPSPGSTEEQKFIQKGASEGNDSLLDLEADNMVFYLGGVPPDFQ
LPASLNFPGFVGCIELATLNDDIISLYNFKRTYNLNTTAERPCTRYKLAFAQSRTANFYF
DGSGYSFVRNIQRRGKFNIATRFNLDIRTPADNALLLLMVKGNTFFSMEMQNGYIRLVYD
FGFSKGPVVLEDTDKKKRINDAKYHEVSFIYHNQKKMILLIDRINVKSVENEKKSMYFTD
VYVGGAPDQVLSSLKSYVATDAGFRGCLRSFQFQRRDFNVLEEDETLGISNGCPEESLMS
RMAYFNGQGFISSSEKITPFSNFEGGFNFRTLQSNGLLFYYNEGPDIFSLSLNNGTVIFK
MKEATMQSTKKQYNDGWNHFIRATVSPSSCQLIVDDEDQTTDDCPTEESVHPKGKFYFGG
SVHDQYVNFTGCISNAYLSRTEKDIAVEDFQTYAEKVQTSLHGCPAETHPAAIIQKHQKY
VAKAKRGRGRKVNSGTAELRKVSVVHSGKTKGNDLHEEARCYLPTHPKTIQHAHQYGGIP
NSRQEIFGIPEYFNRKSHFSVSIRTKSSHGLIFYVANKEEDQFMTLFIARGHLIYSFSNG
REKLKLRSLEKYNDGLWHNVIFTHENNKGRLIIDGLHILEGSLISPVYPWNITEPFYVGG
VPLGKAAKNIQVKSIQSFNGCLRNFQLNRQRLLPASQTFGVTPCFEGPTESGTYFSTEGG
YVILDDSFNLGLQFELVFEIRARNHSGILLHIHSYNRKYLNLFMEYGQVILKVSNGTAEF
KTSVSPKQSLCDGRWHRIAVIRASNVVQLDVDSEVNHLVGPITSHSFSPKEPVFVGGVPE
SLLSSRLSMRQSFTGCMRNFNINETPVIFAKAALVSGGVSINSCPAV
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatttcaccctggctgtgtgctttctccctaaccgcccttggattgttttat
cctgctactggctctggggaaagcagcggtctatccatcagcgcagaagataatatcatg
gggaaatctaccaaccttggagccattcatccaaggggaagacagaacctgtacagtgag
aactgtgccacgggtttctatggcacaactgatggagcatgtttaccttgcaactgtcat
ggacattcggagcagtgccttgatgattctggaatctgcattaactgtcagaataataca
actggggaccactgtgaaaaatgtcttgatggatatattggtgatgttgtccagggtcat
cataagtcttgtcagccttgtccctgccctatgagtattccttcaaataattttgctgtt
tcctgtaagattaaagccgacaaattacattgcttctgtcaggaaaattacgctggatcc
agatgtgaaagatgtgctcctggttactatggaacaccaatgctctatggaagtagttgc
agaaaatgtaactgcaatggtaattctgatcccaatctcatatttgaagactgcaatgag
gaaactgggcattgccgtaattgtctgcgaaatacaacgggcatccattgtgaacgctgt
gcaccagggtactatggagatgctgtcactgctaaaaattgtacagactgtccctgtcag
aaatgtggcacagatgaatgtgatcatgctactggacagtgtcgctgtaagccaggagta
tcaggagccttctgtgaccgctgtgagattggttatcatggatacagcagttgttctgga
tgtttgagatgtgaatgtgctctggcttctaaggatgaatactgtgaccctttgagtgga
cggtgtaggtgccttcctggagtcacaggaaagcgctgtgaccggtgtctgtatgggttc
tggaactatggacgaaatgggtgccagaggtgcaattgtgaagggcagtgtgacagtgag
acaggagaatgtctgtcagcacctaccgaatccccaactgactgctccgttgtcagatgt
gacaagtgtgtctgggacttaattgaagacctaaaattatcaggagcatcactaggagaa
gcaaggttgagtgttctaaatgttattactggagatgccattaataaccgcttgcaggaa
ttcaatatcacagcgattcacttcaacatgcagattgcagacatgttatcacagtcagaa
tcaaagaaacttcagacagaagacattgaagcagctatggtggaccttattgctgatctc
aacatgctgtctgagaaggaaaacataaccatatcgaatgcacagctgtttgataaggag
acagctaaaatcagtgaccgtgccaaccagatcaatggacaaattaacaatattgccgat
ttggtccaagatattattgaaggcctaaacaaatatggaattgaagaagaactgtcagct
gaggaaattagcgaaagctttcatgaggcgaaccagatgttggatgagctgagaaaccgg
aacttttccaaccagaaaccattgactgaagaagaaagaacacaagcccggaatttgtta
aatcgtgttcatgggttttataataagctaatggaagccaatagctcaattcgtaaaata
caggaaaatattaccaaatacaataatgatgtcttagacctgaaggaagcacttgaagat
gcaatcaagactgttcaggagacagaggaaaaaaatgaagaaaacatcaacggttacaaa
agaaaagagagacttcaaaaagtattaaacaaacattttgctgctgtaaatgtgacgctt
ataacggctagtaatggcttgatagatacagaaattgcgatatccgaactagaaaataag
attgtgaacttgtctacattccatgcctcaatagatggtgctcaaaacctactgagggat
aaactgactaatctctcaacatatgacaagcccctggttctccgtgctatagactatgct
gaacagcttcggaaacttgcatcagaattggcgaatattttgaagagtattgatgcaaat
ggaattgtccagaaggctataaatgcttcaaatgtctacgacaatattgttcaatatgta
gcagaggctgaggagaatgcaaccactttactcaatgctgcacagagagctgaggatgct
gtggaaggaattcaaacacagagtacctggctcagaaacagcagtgaggcgcttttgaag
aaagtgagggaactagatgcaaccatgaaggacaatgataagaccacttttcaggatacc
aggcgccatgtggatgcagtaattggcaagaaaaattacacagtaaaccgtttacaaaat
gctgtaaaccagttagcattgattgagccaagtaataagaaccggttcaaccaatcaaag
ctaattgcagaagaagcaaaagacactgctgaaatggtcctgcaggctgtaaatgatatg
gatgagtttttgaaaggctggcctcagaatataagtgcttctgctgaagatgggactgct
ttcaagaagacagtgagctcagctggtgactcagtgaaaaatttgacagaaatagttcca
aaactcttggacaaacttcgaatcgtggaacagaaaaagccagccagcaatatttctgcc
agtattctgcgaattcgagaactcattgcacagacacgcaatgtggccagcaaggttcaa
gtttccatgaaatttgatggccgatctgcagtggaacttcagccaaaagcaaacttggaa
gagctcaagtcttttacttcattgagtttgttcatgcgagttccttcattaagtgaacaa
gctcagggtgccaacaaagacagattcatcatgtaccttggaaacaaaagtggaaaacaa
gattacattggtttgtgtattaaaaatgacaacttagtttatgtccacaatcttggaaat
ggagatgttgagattcctttgaactcaaagccagttagcacctggccaaactacttcaat
ttaatcaaagtagaaagagttggaaggcatggaaaaatacaactaactgtacctagccca
ggtagcacagaagagcaaaaatttatccagaaaggagcaagtgaaggcaatgattctcta
ctagatctggaagctgataacatggttttctatttgggaggagtacctccagatttccag
ctccctgccagcttaaactttccaggcttcgttggctgtatagaactggcaacacttaat
gatgacataataagcctctacaacttcaaacggacatacaacctgaacacaacagctgag
cgaccctgtacaaggtacaagcttgcttttgcccaaagtagaacagcaaatttctacttt
gatggctcaggctattcttttgtacgtaacatacaaaggagaggaaaattcaacatagca
actcggttcaatcttgacattcgcacaccagctgacaatgccctcctgttactgatggtg
aaagggaatacgttcttcagtatggaaatgcaaaatggttatatacgcttggtttatgac
tttggattcagcaaaggccccgttgttctcgaggatactgataaaaagaaacgtataaat
gatgcaaaatatcatgaggtctcattcatttaccacaaccaaaagaagatgatcctattg
attgacagaatcaatgtaaaaagtgttgaaaatgaaaagaagagtatgtattttaccgat
gtctatgttggtggagcacctgatcaggtcttatcaagtctgaagtcctatgtagctacg
gatgctggatttcgaggttgtctccggagtttccagttccaaagacgcgatttcaatgtt
ctagaggaagatgagacattagggatcagcaatggttgtccagaggaatcacttatgtcc
cgcatggcgtatttcaatgggcaaggtttcatctcttccagcgaaaagatcacaccattt
tcaaacttcgaaggaggtttcaattttaggacattacagtccaatgggttgcttttctac
tacaatgaaggacctgatatcttctccctttctctgaacaatggtaccgtcattttcaaa
atgaaagaagcaacaatgcaatcaacaaagaaacaatataacgatggatggaatcatttt
attagagcaactgtctccccatcaagttgtcaattaatagtggacgacgaggatcaaaca
acagatgattgtcccacagaagaatccgtccatcccaaaggaaaattctactttggaggt
tcagtccatgaccaatatgttaacttcacaggctgcatcagcaatgcttacctcagcaga
acagagaaagatattgcagtagaagatttccagacatatgctgaaaaggtacaaacctct
ctgcatggctgcccagctgaaactcatccagccgcaattattcagaaacatcaaaagtat
gttgctaaagccaagagaggtcgaggtagaaaggtgaacagtggtacagcagaattacga
aaagtttcagtggtccacagtggaaagacaaaaggaaatgacctacatgaagaggcacgc
tgctatctaccaactcatcccaagacaatccaacatgcccaccaatatggcggcattcct
aacagtcgacaggagatttttggaatccctgaatatttcaatcgcaaatcccacttctct
gtcagcatcagaactaaatcttcacatggacttatattttatgtggcgaataaagaggaa
gaccagttcatgacacttttcattgcccgtggtcaccttatttactcattcagtaatggc
cgtgaaaaattgaaattaagaagtttagagaaatacaatgatggtctctggcacaatgtt
attttcacacatgaaaataataaaggacgtttaataatagatggtctccacattctagag
ggtagtctcatcagtcctgtttatccatggaatataactgaaccattttatgtgggtggt
gtgccattgggaaaagctgccaaaaacattcaggtcaagtcaatccaaagttttaatggc
tgtcttcggaacttccagctaaacagacagcggttgttaccagcaagtcaaacatttggt
gttacaccttgctttgaaggtccgactgagtctggaacatacttttccacagaaggagga
tatgtgattttggatgattcgttcaatttaggattacaatttgagcttgtttttgaaatt
cgtgcaagaaatcattcaggaatactgttacatattcatagttacaaccggaaatacctg
aatctctttatggaatatggacaggtaatattaaaagtcagcaatggaactgcagagttt
aaaacatcagtttctccaaagcaaagtctgtgtgatggccgatggcatcgaatagcagtt
atcagagcatcaaatgttgtgcagttggatgtggactctgaggtaaaccacttagtgggg
ccaataacgtcacactctttcagtcccaaggaaccagtatttgttggaggagtgccagag
tcactactcagctcaagactgagcatgcgccagtcattcactggttgcatgagaaacttc
aacatcaatgaaactcctgtcattttcgccaaagctgccctggtcagtggaggagtcagc
atcaactcatgccctgcagtttaa
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