Chiloscyllium plagiosum (whitespotted bambooshark): 122561953
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Entry
122561953 CDS
T08871
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122561953 (recql5)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122561953 (recql5)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
122561953 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
ResIII
TFIIS_M
SRI
MTD
Motif
Other DBs
NCBI-GeneID:
122561953
NCBI-ProteinID:
XP_043570217
LinkDB
All DBs
Position
24:complement(2061925..2193929)
Genome browser
AA seq
1007 aa
AA seq
DB search
MASTSCGPVRAALARTFGFQTFRSERQESATRAVLRGDKDVFICMPTGAGKSLCYQLPAV
LAAGVTIVISPLIALIQDQIEHMNVLKIRACSFNSKLSLEERKMVLSDLNSARPDIKLLY
ITPEMAASNTMHSIIDSLLARHLLSYLVIDEAHCVSQWGHDFRPDYLKLGSLRSKAPGIP
CVALTATAPQKVQDDIVAALQLNQPIAVFKSPCFRANLFYDIVFKDILNEPYINLKAFCE
KTLGQKDSAGQFDGCGIVYCRTRDGCQEVAEELTRRGLEAKAYHAGLKNSERTVVQEEWM
EGKVPVIVATISFGMGVDKANVRFVAHWNLAKSMSAYYQESGRAGRDGKPSFCRIYYSRI
DRENISFLIKKEIAQKQSKRGSVKSFDKSSLVGFETLVSFCEQPGCRHAAIAKYFGDEVP
ACNRACDYCKNPEIVMRQLDSLQRFEISKAQTSVKMPTSQGPFGYIHDLYEGGRKGYGFE
RYGNEDDDNESDGENESRKKEWNAFFQKQMKLRKNGESEKDNFVPPDPDCPLRDAANRKI
PKLSVKAREHCLHMLEEALTKNKQHGITKPEWADPHSCAVEMEYEAFKMSKMANLYKALM
LKKVGEINKSMQNNPLHSKLTEMDTTIATTDCEKDGETFISASQLYSFKRKRVGVGGQSS
SSPFRTAGEMLKNSVQVSSAQKNSTSSETPIHQSDGTRKKEDTRSLEVTKPCVHYNERTD
QCSPLQSSPSKRKPTKKQLLAESAKKDSQNITKFFQQSKSKGAARASVKILGGDCSTIVN
DALEEEDNKKAYSSTLALSGELGALPDLDKVTKTVNVDKVQKCVTTHDMEEKTRVRNIEK
APDGKILDHARSRGFEIAPSAPEKRPATDEGRGSQDLKRQRNSINSSILCPPDVKGSQNK
KKVTFDSLFQLCKDERTTMSPVPVKGGQLKQTADIVVKCLTPYYKEGRFASKDLFKAFAR
HLSHLLVVEKNTMKRNVKEAAQDLIHNFFKSCRRCENEDDWRNLKLT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacttcctgcggacccgtccgtgccgctctcgcccggacgttcggcttccag
acattccgctctgagcgacaagagagcgcaacgagagccgtgctgagaggtgataaggat
gtctttatctgcatgccaacaggagcagggaaatctctctgttaccagttaccggctgta
cttgctgcgggtgttaccattgtgatctcgccgctgattgctcttattcaagaccagatt
gagcacatgaatgtactgaagattagagcatgctcctttaattccaaactgtcccttgag
gagcgaaaaatggtcctttctgacttgaattctgcaagacccgacatcaaactgctctac
atcacccctgagatggcagcttccaacaccatgcattccatcattgactccctgctggcc
cgacatctcctttcgtacctggtcatcgatgaggctcattgtgtgtcacagtgggggcat
gactttcgacccgattacctcaaactggggtctttacgcagtaaggctcctggtattccc
tgcgtggctttgactgctacagcccctcagaaggtgcaagatgacattgtagctgctctt
cagctgaaccagcccattgcagtcttcaagagtccttgcttcagagctaatctattctat
gatattgtcttcaaagacattttgaatgaaccctacatcaatctgaaggcattctgtgaa
aagactctgggacagaaggactcagcagggcaatttgatggctgtggcatagtatactgt
cggaccagggatgggtgtcaagaagtggcagaggaactaacacgcagggggttggaagcc
aaggcttaccatgcagggcttaagaattcagaacgcactgtggtgcaggaggagtggatg
gaaggcaaagtacctgtgatcgtggcaaccatcagctttgggatgggtgtggacaaggct
aatgtcagatttgttgcccattggaatcttgcaaaatcaatgtctgcttattaccaagaa
tctgggcgagcagggagagatgggaaaccctcattttgccgtatttattactcaaggata
gatcgggagaacatcagtttcctgatcaagaaagagattgctcagaagcagagcaagaga
ggatccgtgaagagttttgacaaatcctccctggtgggctttgagactctggtttccttc
tgtgagcagccagggtgtcgacatgcagccattgccaagtattttggagatgaggtccca
gcctgtaatcgagcctgtgattactgcaagaacccagagattgtgatgagacagttggat
tctcttcagagattcgaaatcagcaaagctcagacatctgttaaaatgccaacatcccag
gggccttttgggtacatccatgatctgtatgaaggaggaagaaagggctatggctttgaa
agatatggtaatgaagatgatgataatgaatcagatggagaaaatgagtccagaaaaaaa
gagtggaatgcattttttcagaaacagatgaaactgcggaagaatggagagtctgaaaag
gataactttgtaccacctgatcctgactgccccctccgagatgcagctaatcggaaaata
cccaagttgtctgtcaaggcacgtgaacactgtctccacatgctagaggaggcactgacc
aagaataaacagcatggaattacaaagccagagtgggcagaccctcactcatgtgctgta
gaaatggaatatgaagctttcaaaatgagcaagatggctaacttgtacaaagcactaatg
ctaaaaaaggttggagaaataaataagtcaatgcaaaataatcctttgcattcaaaactg
acagaaatggacactacaatagcaacaacagattgtgaaaaagatggtgaaacatttatt
tccgcatcacagctctattctttcaaacgaaagcgtgttggagttggaggtcagagttca
tccagcccattccgaaccgcaggagagatgctgaagaactcagtgcaagtgagcagtgcg
cagaagaatagcactagctcagagaccccaatacaccaatcagatggaaccagaaagaaa
gaagatacaagatctctagaagtcacaaaaccctgtgtacactataatgagaggacagat
cagtgctcccctctccagtccagtcccagcaagaggaaacccactaaaaagcaattgctg
gcagagagtgccaagaaagattctcagaatattaccaaattctttcagcagagcaaatct
aaaggggcagcaagggcttcagtcaaaatccttggtggggactgcagcaccattgttaat
gatgcactggaagaagaggacaacaagaaagcatactcttccactttggcgttgtctggg
gagctgggagctcttccagatcttgataaagtgacgaagactgtaaatgtggacaaggtc
caaaaatgtgtgacgacccatgacatggaagagaagacaagagttagaaacatagagaaa
gctcctgatgggaaaatactggatcatgcaagaagccgaggatttgaaattgctccctct
gctcctgagaaacgaccagcaacagatgaaggacgagggtcacaggacttgaaacgacaa
cgaaatagcatcaattcctctatcttgtgccctcctgatgttaagggcagtcaaaataag
aaaaaggtgacgtttgactccttgtttcagttatgtaaagatgagagaaccacaatgtct
ccagttccagtgaaaggaggacaactgaaacagacagcagacatcgtcgtcaaatgcctg
actccttattacaaggagggaaggtttgcttctaaggatttgttcaaagcctttgctcga
cacctttctcatttactggttgttgaaaagaatactatgaaaagaaatgtaaaagaagca
gctcaagatctaatccacaatttctttaaaagctgcaggaggtgtgagaatgaggatgat
tggagaaacctcaaattaacatag
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