Collimonas pratensis: CPter91_3162
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Entry
CPter91_3162 CDS
T04306
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPter91_3162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_3162
Enzymes [BR:
cpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CPter91_3162
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPter91_3162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMP05497
UniProt:
A0A127Q643
LinkDB
All DBs
Position
complement(3261164..3262066)
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AA seq
300 aa
AA seq
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MSEVSRRSVFLDEIGLGPIWLRREGVLASTETGAELADVSPPVDMTVAAPAPTVAMSDPE
LQPYAVPAPETAVALARDAAPSAWTEDEAAIPAPPAPARAIASLQSPAAMDWPQLQKAVA
ECTACGLCRGRKNTVFGVGDSKARWLFIGEGPGRNEDSQGEPFVGPAGKLLDNILLAMGL
ARGENAYIANIVKCRPTDENGRDRPPAADEVAACLPYLQRQIELIQPTVLVALGKTAALS
LLGLDPSTPVSKLRGSVHRYAERPLIVTYHPAYLLRQLADKGKVWSDLCLAMSTYANIPE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtgagcaggcgcagcgttttccttgacgagattggactggggccgatctgg
ctgcggcgcgagggcgtgcttgcctcgaccgaaaccggagcggagctggccgatgtttcg
ccgccggtagatatgacggttgcggcgcccgcgcccactgttgccatgagcgatccggag
ctgcagccctatgcagtgcctgcaccagaaaccgctgttgcgctggcacgggatgcggcg
ccctcggcctggaccgaagatgaggccgcgattcctgcgccaccggcgccggccagggct
attgcatcgctacagtcgccggccgcgatggactggccgcagctgcagaaagcggttgcc
gaatgtactgcctgcgggctgtgccgcggacgcaagaatacggtgttcggcgtcggcgat
agcaaggccagatggctgttcatcggcgaaggcccgggccgtaacgaggatagccagggc
gaaccgttcgtcggcccggccggcaagctgctcgacaatatcctgctggcgatgggactt
gcgcgcggcgaaaacgcctatatcgccaacatcgtcaaatgccgtccgaccgatgaaaac
gggcgcgaccggccgcctgctgccgacgaggtggcggcctgcctgccatatctgcagcgc
cagatcgaactgatccagcctaccgtgctggtggccttgggcaagaccgctgccttgtcc
ctgctggggcttgatccctctacgccggtgtccaagctgcgcggcagcgtccatcgttat
gctgagcgtcctttgatcgtgacctatcacccggcctatctgctgcggcaactggcggac
aagggcaaggtctggagtgatctgtgcctggcgatgagcacctatgccaacataccggaa
tga
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