KEGG   Anaerotignum propionicum: CPRO_26580
Entry
CPRO_26580        CDS       T04574                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
cpro  Anaerotignum propionicum
Pathway
cpro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CPRO_26580 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpro03019]
    CPRO_26580 (rnjA)
Messenger RNA biogenesis [BR:cpro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CPRO_26580 (rnjA)
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6 Ntox27 CFAP54_N
Other DBs
NCBI-ProteinID: AMJ42206
UniProt: A0A0X8VE12
LinkDB
Position
complement(2750313..2751995)
AA seq 560 aa
MAGRKPKPKAKLKIAALGGLEEIGKNMTMLEYGNDIMVIDCGLAFPEDDMLGIDLVIPDV
TYLIKNIDKVRGIVLTHGHEDHIGALPYILKQLNVPVFGTLLTLGLLENKLREHKMLDKT
VLHTVVPRERVNLGQFNVEFIHTNHSIADSVALAIHTPIGTVVHTGDFKVDYTPIDGEII
DLQRFGELGKEGVLLLMSDSTNAERKGFTMSEKNVGKVFEKIFEDTPKNRIMVATFSSNI
HRIQQVVNAAYMYGRKVAIIGRSMVNAVKTASELEYLAIPPRTLIDIGEIKNYKDEQLVI
ITTGSQGETMSALTRIAMNEHKQVNVKPEDKIIISASAIPGNEKNVTRVINELLKKGANV
IYGDMEEIHVSGHARQEELKLMLALTKPKFFMPVHGEFMHLSCHKDLALSMGLDKNNIFI
MKLGEVLEVTRNEAKVNGTVPAGRVMVDGLGVGDVGNIVLRDRKHLSQDGLMVVVVTLDR
ESGTIVAGPDIISRGFVYVRVAEDLMDEAKKVVLEALLDCEEKNITSWNYIKGVIKDTLK
NFLWQKTKRSPMILPIIMDV
NT seq 1683 nt   +upstreamnt  +downstreamnt
ttggcaggaagaaaaccaaaacccaaggcaaagcttaagattgccgcattgggtgggtta
gaagaaatcgggaaaaatatgaccatgcttgaatatggtaatgatattatggtcattgac
tgtggtctggcattccctgaggatgacatgctgggaattgacttggttatccccgatgta
acttatctgatcaaaaacatagacaaagtaaggggtattgtactgacccatggtcatgag
gatcatattggtgcattaccttatattctgaaacagctgaatgtacctgtatttggtacg
ctattaaccttagggctgttggaaaacaaactaagagaacacaaaatgctggataaaact
gttttgcataccgttgttccaagagagcgggtgaatttgggtcagtttaatgtggaattc
atccacaccaatcactccattgctgattccgtggcgctggcaattcatacacccatcgga
acggttgtgcacacgggagatttcaaggtggattatacacccattgatggggaaattatt
gacctacagcgttttggagagttaggaaaagaaggcgttcttctgttaatgagtgatagt
accaatgcggaaagaaaaggcttcactatgtctgaaaagaacgttggtaaggtttttgag
aaaatttttgaggatactcccaaaaaccgcattatggttgcaacattctcgtccaacatc
catcgaatacagcaggtggtaaacgctgcttatatgtatggacgtaaggttgccattatc
ggcagaagtatggtcaatgcagtgaaaactgcttccgagttagaatatttggccattccc
cctcgcacactgattgatattggcgaaattaaaaactataaagatgaacagcttgtgatt
atcaccaccggcagtcagggtgaaaccatgtctgccctcaccagaattgcgatgaatgag
cataagcaggtaaacgtgaagcctgaagataaaattatcatcagtgcatcggcaataccc
ggtaatgaaaagaatgttacccgtgttataaatgagcttttgaagaagggcgcaaatgta
atttacggagatatggaagaaatccacgtttccggtcatgcgagacaagaggagcttaag
ttgatgcttgcgttaacaaaacccaaattctttatgcctgtgcatggtgaatttatgcat
ctttcatgccataaggatttagcgctttccatgggcttagataaaaataacatcttcatt
atgaaattgggtgaagtgttggaagtgacacgcaatgaggccaaggttaacggtacagta
cctgccggtcgtgttatggtagatgggctgggtgttggtgatgttggtaacattgtattg
cgagacagaaagcacttatctcaggacggtttgatggtggtagttgtcaccttggatcgg
gagagtggtaccattgttgctgggcccgatattatttccagaggttttgtatacgttcgt
gtagcggaggacctgatggatgaagcgaaaaaagtggtgctggaagcattactggattgc
gaagaaaagaatataaccagttggaattatattaagggtgtcattaaagatacactgaaa
aatttcctctggcagaaaacaaaaagaagccccatgattttaccaattatcatggacgta
taa

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