Colwellia psychrerythraea: CPS_0077
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Entry
CPS_0077 CDS
T00258
Symbol
dapF
Name
(RefSeq) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00300
Lysine biosynthesis
cps00470
D-Amino acid metabolism
cps01100
Metabolic pathways
cps01110
Biosynthesis of secondary metabolites
cps01120
Microbial metabolism in diverse environments
cps01230
Biosynthesis of amino acids
Module
cps_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPS_0077 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPS_0077 (dapF)
Enzymes [BR:
cps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CPS_0077 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AAZ24959
UniProt:
Q48AR8
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All DBs
Position
79259..80089
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AA seq
276 aa
AA seq
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MLVNFSKMHGLGNDFLVLDNVTQNVFLSPEQITKFANRNFGVGFDQLLVVEPPYDPDLDF
HYRIYNADGSEVGQCGNGARCFAKFVRMKGLCNKHKIKVSTSTGKMNLHIERDGNISVTM
PVPQFEPKKIPFTAQKTEGTYILRSESETVLCGAVSMGNPHCVVTVDSVAEADVESLGKE
LSVHERFPEDANVGFMEIVSPNYIKLRVYERGAAETLACGSGACAAVVIGYMQKKLAKQV
TVELPGGKLRIFWQGPGHPVKMSGPATHVFDGQISI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcaatttttctaaaatgcatggtttaggtaatgactttttagtgcttgataat
gtcacacaaaatgtttttttatcgccagaacaaatcactaagtttgctaacagaaacttc
ggtgtcggctttgaccaactattagtggttgagcctccttatgatccagatttagatttt
cattaccgtatttataatgccgatggtagtgaagtaggacagtgtggaaatggcgctcgc
tgtttcgcaaagtttgtccgtatgaaaggtttatgcaataaacataagataaaagtttct
accagcacaggtaaaatgaacttacatatagagcgtgatggtaatatttcagtcactatg
ccggtgccacaatttgaaccaaaaaaaatcccttttactgcacaaaaaacagaaggtact
tatattctgcgtagtgaaagtgaaacggtattatgtggtgctgtctcaatgggtaacccc
cattgtgtagtgactgtcgatagtgttgcagaagctgatgttgaatcactcgggaaagaa
ttatctgtacatgagcgtttccccgaagatgctaatgtcggttttatggaaattgttagc
cctaattatattaaattaagagtgtatgaacgtggagcagcagaaacgttagcatgtggt
agcggtgcttgtgcagccgttgttattggttatatgcagaaaaaactagcgaaacaagtc
accgtagaactgccaggtggaaaattacgaatattttggcaaggaccgggtcatccagtg
aaaatgtctggaccggcaacacacgtatttgatggtcaaatatcgatataa
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