Coccidioides posadasii: CPC735_056050
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Entry
CPC735_056050 CDS
T01332
Name
(RefSeq) tRNA-splicing endonuclease subunit, putative
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cpw
Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:
cpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpw03016
]
CPC735_056050
Enzymes [BR:
cpw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CPC735_056050
Transfer RNA biogenesis [BR:
cpw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CPC735_056050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
9691850
NCBI-ProteinID:
XP_003066380
UniProt:
C5PI82
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MVNTPVLPIPISFISGHYFLFSTDAVTYLRREHNICGVLIGTLPQIPQQNIFLGLPLELM
PEEARLLVEKKIAYIVDDAQVHNQGMKTLADEDRRRHLESLEQHGRRAALVQSSKKEHLK
EKALKQSKKSKSQTSDASKASSSLQDGQGQSEDLLFSSVDDRTNDPIQSSSAVTSRAVFG
VTPADSLALFPKPPPLGGNSLPKVPSSYPLYAHLHSKGYFLSPGLRFGCQYMAYPGDPLR
FHSHFLVSASEWDEEINLMDLVVGGRLGTGVKKGYLIGGEIPSDEQEKGTDERTVRTFSL
EWAGM
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacaccagtgctcccgattcccatttccttcatatcgggccattattttctc
ttctcaactgatgcagtcacctatctacgccgagaacacaatatttgcggcgttctcatt
gggactctgcctcagattccgcagcagaatatcttcctgggtttaccattagagcttatg
ccggaagaggctaggctcttggttgagaaaaagattgcttatattgtggatgatgcacaa
gtgcacaatcaaggaatgaagactctggctgatgaagatcggcgacgtcatcttgagagc
ttggagcaacacggacggcgagcagctttagtccaatcaagcaaaaaagaacatctaaaa
gaaaaagcgctgaagcaatccaaaaaatcgaaatctcagacctcagatgcatcaaaagcg
tcgagttccctgcaagatggacagggacagtcagaagacctgctttttagttctgtagac
gaccgtactaacgaccccatccaatccagttcagccgttacttcacgagccgtatttggt
gtcactcctgcggactctctcgctctctttcccaaacctccacccttaggtgggaattct
ctgccaaaggtcccttcatcatatcctttatacgcccatttgcattccaaaggatatttc
ttgtctcccggtctccgttttggttgccagtacatggcttacccaggtgatccgcttcga
ttccactcccatttcctcgtttccgcctctgagtgggatgaggagataaatttaatggac
ttggttgttggaggtcgtctaggaaccggtgtaaagaagggatatcttatcggcggagaa
atcccgtccgatgagcaagaaaaaggaaccgatgaaaggactgtgaggacgtttagtttg
gaatgggctggaatgtaa
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