Corynebacterium pseudotuberculosis I19: CPI19_08315
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Entry
CPI19_08315 CDS
T01878
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Pathway
cpx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPI19_08315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpx03400
]
CPI19_08315
Enzymes [BR:
cpx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPI19_08315
DNA repair and recombination proteins [BR:
cpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPI19_08315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADO25911
LinkDB
All DBs
Position
complement(1801924..1802745)
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AA seq
273 aa
AA seq
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MPEGDSIYQLSHRLRFMEGRKVLGTSIRVPQLALATFTGRTVKRVWPYGKNLFMQIGEDI
LHTHLKMEGAWAVYRKGDRWSKPAHTARVQLLLDGTPQKRSIEVVGFSLGFVRIFPACDY
PGAIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRNLAGVGNEYRAEICFL
CGVHPATRVRDVDVDRILLITRRLMWANRLSTVRVTTGIKRLGETTYVFGRNHKPCRRCG
TRILQSTLVDDPSSELERIIWWCPHCQPFYSEP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggagactccatttaccagctatcccataggttgcgttttatggaaggccga
aaggtccttggaaccagcattcgagtgccgcagttggcccttgccacttttaccgggcgc
actgtgaaacgagtatggccctatgggaagaacctgtttatgcagataggggaggacata
ctgcatacccatctgaaaatggagggcgcatgggccgtgtataggaaaggcgatcgatgg
tccaagcctgctcacacagcccgcgtacagttactgctggatggaacgccacagaagcgc
tctattgaggtggtgggattttctttaggatttgtccgtatctttcctgcttgtgattac
cctggcgctatagcccatctagggcctgacgtgctgggacagtcttgggagaataccggt
catagtgaagcccggcgacgtatactcttggatcctgaccgcgccatagggttagccata
cttgatcaaaggaacctggcaggagtgggtaacgagtatcgggcggagatctgttttctt
tgtggagtgcaccctgcaacccgggtacgtgacgtcgatgtggaccgcatacttctcata
acacgccggctgatgtgggcaaatcgcctttccacagttcgggttacaacaggaatcaaa
cgactaggcgaaaccacttatgtgttcgggcgtaaccataagccctgccgaaggtgcggt
actcgaatcctccagagcacgcttgtcgacgacccctcctcagaattagagcgaattatt
tggtggtgtccgcactgccagccattttattctgaaccttaa
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