Lachnoclostridium phytofermentans: Cphy_0296
Help
Entry
Cphy_0296 CDS
T00619
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpy03032
]
Cphy_0296
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_0296
Enzymes [BR:
cpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Cphy_0296
DNA replication proteins [BR:
cpy03032
]
Prokaryotic type
DNA Topoisomerases
Cphy_0296
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cphy_0296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ABX40683
UniProt:
A9KS52
LinkDB
All DBs
Position
complement(369348..371276)
Genome browser
AA seq
642 aa
AA seq
DB search
MEQYNGSQIVVLEGLEAVRKRPGMYIGSTGTRGLHHLIWEILDNGIDEHLAGFCNQLEIT
LLKDGGISIADHGRGVPVDIHPTKKIPTARVVYTILHAGGKFGGSVYKVSGGLHGVGASV
VNALSTRMIVEIRRDGKIYRDEYEHGGHPCVELENGMLPVVGKCNKSDTGTKVTFYPDPT
IFETVEFKAETITKKLKEVAFLNKNLSIVFYDQNTGFKKTYCEEFGIKSFVSYINREASV
IHEEPIYIEGKSGDIEVEVALQYTNSFSEQINAYCNRINVVDGGTLVTGFKTALTRVMNQ
YARELGVLKEKDENFDGKDIRNGLVTIISIKHPDPQFEGQTKTKLGNTDAKSAVEDVFSG
EVTRFFDKNVEILKAILENSMRSYTARKASDKARSAVLKQLNDIDTKSKLASCSSKKPEE
CEVYIVEGDSAGGTVKTARNRRTQAVLPLRGKIINVEKATLEKILVNNEIKSMIASFGCG
IGEDFDISKLRYDKIIILTDADVDGAHISTLLLTFFYRFMPELIMEGKIYRGLPPLYRVE
YETSEGKKKKKFEYIYNDFELDKFRKNTKHKIIHIQRYKGLGEMDAEQLWETTLNPETRV
LAQVSITDTVDADETTTLLMSNNVPPRRAFIMDEAKYAKLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatacaatggcagtcaaattgtagtactggaaggcttagaagccgttaggaaa
cgacctggtatgtacatcggtagtactggtacaagaggtctacaccaccttatatgggag
attcttgataatggtattgacgagcatttagcgggtttttgcaaccagcttgagattact
ttactaaaagatggcggaatttccatcgcagatcatggtcgaggagttcctgtcgacatc
catccaacaaaaaaaatacctactgcacgagttgtctatacgatactccatgccggcggt
aagtttggaggttccgtatacaaagtatccggaggtcttcacggtgtaggtgcttccgtc
gtaaatgcactttccactcgtatgattgtagaaattagacgagatgggaaaatttatcgt
gatgaatatgagcatggcggacatccatgtgtagaacttgagaacggaatgttacctgtc
gttggaaagtgtaacaaatctgatactggcacaaaagtaaccttttatccagatccaact
atttttgagacagtagaatttaaagcagaaaccataacaaaaaaactaaaagaagtggca
tttttaaataagaacttatccatcgtattttacgatcagaatactgggtttaagaaaacc
tattgtgaagagttcggtattaaaagttttgtttcctatattaaccgagaggcttccgta
atccacgaagaacccatctatattgaaggaaagagcggagacatcgaagttgaagttgcg
cttcaatatacgaatagtttttcagagcaaattaatgcttattgtaaccgaatcaacgtt
gttgatggtggtaccttagtaactggatttaaaaccgctctaacacgtgtcatgaatcaa
tatgcaagagaacttggcgtactgaaagaaaaagatgaaaattttgatggaaaggacatt
cgtaatggacttgtaaccatcatatcaataaagcatcctgaccctcaatttgaaggacag
accaaaacaaaacttggtaataccgatgcaaaaagtgcagtcgaagatgttttttctggg
gaagtaaccagattttttgataaaaatgtggagattttaaaggctattttagaaaactca
atgcgctcctacacggctagaaaggccagtgacaaagcacgtagcgctgtactaaagcaa
ctaaatgacattgacaccaagagtaaacttgcttcatgctcctctaaaaaaccagaggaa
tgtgaagtgtatatcgtagagggtgattccgcgggaggcactgtaaaaacagcaagaaat
cgtcgtacacaagcagttcttccgctacgtggtaaaatcattaatgttgaaaaagcaaca
ttggaaaagatcttagttaataatgaaatcaaatccatgattgcttcctttggttgtgga
attggcgaggattttgatatctcaaaattgcgttacgataaaattattatcctaacggat
gccgatgtcgatggagcacatattagtaccttacttctcacctttttctatcgatttatg
ccagagctcattatggagggaaaaatttaccgcggacttccaccactataccgtgtagaa
tatgaaacttcggaaggaaagaagaaaaagaagtttgaatatatctacaatgatttcgaa
ttggacaagtttagaaaaaataccaagcataaaataattcatatacagcgttacaaagga
cttggtgaaatggatgcagagcagttgtgggaaaccaccttaaatccagaaacaagagta
ttggcacaagtatccatcacagatactgtcgatgcagacgaaactacaacattgctaatg
agtaataatgtacctccacgtcgtgcatttatcatggacgaagcaaaatatgcaaaactt
gatatataa
DBGET
integrated database retrieval system
