Chenopodium quinoa (quinoa): 110684659
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Entry
110684659 CDS
T05764
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cqi03016
]
110684659
Enzymes [BR:
cqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110684659
Transfer RNA biogenesis [BR:
cqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110684659
Prokaryotic type
110684659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
110684659
NCBI-ProteinID:
XP_021716786
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAVWSLRLPLTTSWRNGRLKPLSYPWNFSLSNHNIHLLAHFSATSSSPSISASTQTQEPQ
IQPQISQTQELIASPSKWEAFRKKKVVMRVGYVGSNYKGLQKQREENVPTIEEALENALY
KVGGINETNYGNLHKIAWARSSRTDKGVHSLATTISLKLEIPDYAWMNDPNGLVLADHVN
SHLPDDIRVFSILPSQRSFDPRRECHVRNYSYLLPAEVIGITSHSSSAEIDYHIKDFNEI
LNIFEGEYPFHNYTARSKYRRKPLKGRANRRHKISDKPPLMEVEDNNADCHSSVDDADAL
CDEELITNMPDDGDLDALFDSEDGHGDESEKNDSTVVIKARWLHERDEADKLSSAHWRKI
FQCSCGKLERSLDLGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILKLSLNKFSR
IVLPLAPSEVLVLRGNDFRLRKQPGNKKRPEMRILVNSEEIKNVVDKFYVTMMLPQVAKF
LDPHKSPWKEWLEILDANASIPESELDEVRNAWNAWNEEFQNRLNRIVTIEKTGALDE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttggtctctgcgtcttccattaacaacttcgtggagaaatggcagacttaaa
cccttgtcatatccatggaatttctctctctccaaccataatattcatctacttgctcat
ttctctgctacttcttcatcaccttcaatttctgcttctactcaaacccaagaacctcaa
attcaaccccagatttctcaaactcaggaattaatcgcttcgccttcgaaatgggaggca
ttccggaagaagaaagtggtcatgcgagtcggttatgttggttccaactacaaaggtttg
cagaagcaacgagaagaaaatgttcccaccattgaagaagctttggaaaatgctctttac
aaagtaggtggcatcaatgaaaccaattatggtaacttacataagattgcctgggctagg
agtagccgaactgataaaggagttcactcactggccacaacgatatctttgaaattggaa
attcctgattatgcgtggatgaatgaccccaatggtctcgttctcgcggaccatgttaac
tctcatctccctgatgatataagagtgtttagtattttaccttctcaaaggagctttgat
cctcgacgggaatgtcatgtccgaaattattcctaccttcttccggctgaagttattgga
ataacaagtcactcctcttctgctgaaattgactatcatataaaagacttcaatgaaatt
ctaaatatattcgagggagaatacccttttcataactatacagctaggtctaaataccga
cgaaagccactaaaaggacgtgcaaatagaagacacaaaatatctgataagcctcccctt
atggaggttgaggataacaatgctgattgtcattcctcagttgatgatgcagatgcattg
tgtgatgaagaacttattactaatatgccagatgacggtgatcttgatgcgttgtttgac
tctgaagatggccatggtgatgagtcagaaaagaatgattctacagtagtcattaaggct
cgatggcttcatgaacgtgatgaggcggacaagctcagttctgctcattggaggaagata
tttcagtgttcttgtggcaagttggagaggtcacttgacctgggttttgtggagctctca
atatgcggggagtctttcatgctgcatcaaatccgcaaaatggttggcactgctatagca
gttaagcgtggattgttccccagagatattctcaagctatcactcaacaagttctcaaga
attgtcctacctcttgctccatcagaagttttagttttgagaggaaatgacttcagattg
aggaaacaacctgggaataaaaaaaggccagagatgcgaatattagttaattctgaagag
ataaaaaatgtagtagataagttctatgtaactatgatgctacctcaagttgctaagttt
ttggatcctcataagtctccctggaaggaatggcttgagattttggatgcaaatgcaagc
atacctgaatcagagttggatgaagtcagaaatgcctggaatgcgtggaatgaagagttt
caaaacaggttaaacaggatagttactatagagaaaactggagcattagatgaatga
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