Chenopodium quinoa (quinoa): 110691046
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Entry
110691046 CDS
T05764
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110691046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110691046
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110691046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
110691046
NCBI-ProteinID:
XP_021723674
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MQRQRSILSFFQKPSPVNRNSTAGDKLNAAGNRHSLPSQPSFNGGPKKPNNTASASTISQ
LEEIRGTDTPPEKVPRQVQFDDLTPTDNKKSSVFSSILHKFAKIDPVDKNSQRNQDKGGS
SVVCSMFDMFNECNKVPKESGSCKVPEKNSNGALNKDYSVKSNCEVINLEPDTPSGRPFV
PRLKRIQEDCTNFGNISDFNLLNSSKRVKFAENTKPVNKSPQEVSEVASKFEWLHPSKIR
DANGRRPSDPLYDKRTLYIPFDVLKKMSASQKQYWNVKCQYMDVLLFFKVGKFYELYELD
ADIGHKELDWKLTNSGVGKCRQVGISESGIDDAVQKLVARGYKVGRIEQLETSDQVKARG
VNAVIPRKLVNVITPSTAADETIGPDAVHLLAIKEGSCGVDGGTSVYGFAFVDCAALKIW
IGSVSDDASCAALMALLMQVSPKEIIYESRGLSREAQKVLKKYSSTGSMGVQITPMLPVN
GFLEAAEVKAVIQTKKYFKDSGNLWDHLLDGVTNHEFTLCALGGLIDHLSRLMLDDVLCY
GAVLPYQVYRGCLRMDGQTLINLEVFQNNADGGSAGTLFKYLDNCITPSGKRLLRSWICH
PLKDIDEINNRLNVVEALIMRSEIMLIIAQYLRKIPDLERLLGKVKAMVHSQAILTLPLV
GKKTLKQRVKVFGLIVKGLRIGMDLMNVLYNEEHLMSRLSKIMDLPQLSEQNALSEFLSQ
FEAAIDSDFPKYQDHDATEADAETLSILIELFVEKASQWSKVIFALCCIDVLRSFTAIAI
DSSGSMCRPSILPQSTSIVCQNNEGPTLKFKGLWHPFALRESGLPVPNDIVLGKDTNGHL
PRTLLLTGPNMGGKSTLLRAACLAVILAQLGCYVPCETCSLSVADIIFTRLGATDRIMTD
ESTFYIECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFA
THYHPLTKEFASHPHVSLQHMSCAMKPRSSTGEDFDLVFLYRLATGACPSSYGLQVALMA
GIPKQVVESATTAAEAMKEMIGKSFKSSEQRSEFSTIHEQWLKSILSLACCKDSNLDDDT
YDTLFCLWHELKISYKNSTAPL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacaaaggtcaatcctctccttcttccaaaaaccctcgccggtaaaccgcaac
tccaccgccggcgataagctcaacgccgccggaaaccgccacagcctcccttctcagccg
agcttcaatggcggtcctaagaaacctaacaacactgcttcggcatcaactatttctcaa
cttgaagaaatccgaggaactgacactcctcccgagaaagttcctcgtcaagttcaattt
gatgatttaactcctactgataataagaaatcttccgttttctctagtattttgcataaa
tttgctaagattgatccagttgacaaaaattctcagcggaaccaagacaaaggtggatca
tcggttgtttgctcgatgtttgatatgtttaatgaatgcaacaaagtgcccaaggaatct
ggctcttgtaaggttcctgaaaagaattctaatggggcgcttaacaaggactattcagtg
aaaagcaactgtgaggtcattaatcttgaaccagataccccatcgggccggccctttgtt
ccacgcctaaagcgaattcaagaggattgcactaattttggcaatataagtgatttcaac
ttgttgaactctagcaaaagagtgaaatttgctgaaaatacaaaaccagtaaacaagagt
cctcaggaggtttcagaagtagctagtaagtttgagtggctccatccttcaaagattagg
gatgcaaatggaagaaggcctagtgatcctctttatgataaaaggacactatatatacca
tttgacgtcttaaagaaaatgtcagcgtcacagaaacagtactggaatgtgaaatgtcaa
tacatggatgtgctgctcttctttaaagtgggaaaattctacgaactatatgagctagat
gctgacatagggcacaaggaactggattggaaactgaccaatagtggtgtggggaaatgt
agacaggttggtatttctgaaagtggcattgatgatgccgtgcagaagttggtagctcga
gggtataaagttgggcgaatagagcagctagagacatctgatcaagttaaagcaaggggt
gttaatgctgttatccctagaaagttagtcaatgtgatcacaccatcaacagcagctgat
gaaaccatcggccctgatgctgtccatcttctggcaataaaggagggatcttgtggggtg
gatggtggtacttcagtatatgggtttgcttttgttgattgtgctgcattgaagatttgg
attggttctgtcagtgatgatgcatcctgtgctgctctgatggccttgttgatgcaagtt
tcaccgaaggaaattatttatgaaagtagaggattatcaagagaagctcaaaaagtgctt
aaaaagtactcatctacaggttccatgggtgtacaaattacacccatgcttccagttaat
ggtttcttggaagccgcagaagtgaaggctgtgatccagacaaagaaatacttcaaagat
tctggcaacctctgggatcatctgcttgatggtgtaacaaatcatgaatttaccttgtgt
gctttgggcggtctcattgatcatttatcaaggttgatgttggatgacgttttatgctat
ggagctgtgttgccataccaagtatatagaggttgcctcagaatggatgggcagacactt
attaatcttgaagtttttcagaacaatgctgatggtggttcagctggtacattattcaaa
tatcttgacaactgtataaccccttctgggaaacgacttctgaggagctggatttgtcat
ccactaaaagacattgatgaaatcaataatcggctgaatgttgttgaggccttaattatg
cgttctgaaatcatgttaatcatagcacaatatttgcgcaagattccagacctggaaagg
ttgcttggcaaggttaaagctatggttcattcacaagctatactcacgttgcccttggta
ggaaagaaaacattgaaacaaagggtgaaagtatttggactgattgttaaaggtttgcgg
attgggatggacttaatgaatgtgctatacaatgaagagcatctcatgtcacggctatcg
aaaataatggacctaccccagcttagtgagcaaaatgcgcttagtgagtttcttagccag
tttgaagcggctatagatagtgactttcccaagtatcaggatcatgatgcgacagaagct
gatgcggagacactttctattttgattgagctgtttgttgaaaaagctagtcaatggtct
aaagtaatatttgctctttgttgcatagatgtcttaagatctttcaccgccattgctatt
gattcaagtggatctatgtgtcgaccttctatattaccccagtcaacttctattgtttgc
caaaataatgaaggacctacattgaagttcaaaggattgtggcatccatttgccctaaga
gaaagtgggttgcctgtgccaaatgacatagttctgggtaaggatacaaatggccatctt
ccgcggactttgctgttgactggaccaaacatggggggcaaatccacactcttgcgtgct
gcctgtctagctgttatattggcacagctcggatgctatgttccatgtgagacgtgttct
ctatcagttgctgacattattttcacaaggcttggtgcaactgatcggattatgaccgat
gaaagtacattttacattgagtgtgctgaaacagcatcagtcctccaaaatgcaacacag
gattctcttgtccttcttgatgagctaggtcgaggaacaagtacttttgatggatacgcc
atagcatatgctgtgtttcgccatctaattgagaaggtgaactgtcgtttgctgtttgcc
actcattaccacccgttaacaaaggaattcgcgtcccatcctcatgtttctctgcaacac
atgtcttgtgctatgaaaccaagatcctccactggagaggactttgatttggtgtttctc
taccgacttgcaactggagcttgtccttcaagctatggcttacaagtggctcttatggct
ggtatacccaagcaagtagtagaatctgctacgactgctgctgaggcaatgaaagaaatg
atagggaagagcttcaagtcaagcgagcaaagatcagagttctcaaccatccatgaacaa
tggctaaaatccatactttctcttgcatgttgcaaagacagtaatcttgatgatgatact
tatgataccctgttttgcttatggcatgaactaaaaatctcatataagaactctacggct
ccgttatag
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