Chenopodium quinoa (quinoa): 110699341
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Entry
110699341 CDS
T05764
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110699341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110699341
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110699341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DUF87
Motif
Other DBs
NCBI-GeneID:
110699341
NCBI-ProteinID:
XP_021732548
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MRKRSLHLALHPFDDHPFEVFYQGMWKTVDRLRISSGTITFSFLDLGYLFEEKSFLSTLR
LRPRRATLTDCTCVLRPGADVSVFSTPDDAEESSEESPTGWFDARITSVERKLHDSECNC
KFYIKFYYISDDNAGTDRKKLSKEIETVGINQISVLQVLEQRPSENTHYRWNLAEDCTSL
SRTKLFLSKFASDISWLLVTSVQKQTVFDVRAIEKKIVYQILDTNFSPYSTSVRLSSVNF
RTDGDITFSAVFSFVPVDNEQVPPVPEVKEEEDPLSGYELTELRRSKRRNVQPERYLGEI
GLEVTDTTALRIGYKFWNQEDLAIVLVNNDEDRNSVLEDPQQNLQHAIELYSGDRIGVET
IDENLVKDCTSDEDSQKQKQRKRKYVRKEKENKKKNAEKAGRENQLAIVPLSDGNNQMPR
EQSHLLNEIRQNPLDIDDDNVPLKFYKRRFRERRTTTSTSMSGRMKKISELDDYDHEPGH
GRRNFSHKQNQKFKHRPFASSRSDKHSEDPSRNKKKPLDISAYKDLISTYMKNIQLTIEN
KQPISTDAWKNLQGASSMYEKKAADEARPPEEVEEEEESETEMLFREMDLCLASAYFEEE
HSKAENGDEPAEKFFKNDGSCQHVFTIDDEIGILCRLCGYVITEIRDVTPPFMRQSGFTA
KHDRYDNKTEKDDTEHKLLDEACADLVYNPASYETLVSESNDNVWGLIPSIKKKLHDHQK
KAFEFLWRNLAGSLIPSEMEPSSKKVGGCVISHAPGAGKTFLIIAFLVSYLKLFPGKRPL
VLAPKTTLYTWYKEIIKWEFPVPVYQIHGRRTYRDRIYMQKVGTASSSLVPNGDIMHVLD
CLEKIQKWHAHPSVLLMGYTSFLSLMREDSKYAHRRYMGQILRESPGILILDEGHNPRST
KSRLRKALMRVDTEFRILLSGTLFQNNFGEYFNTLCLARPKFVDEVLRVLDPKYKKKIKG
QNKTRTSIENRARKVFMDIIARKINSSETEERADGLNMLKNMTNKFIDVYEGGGSENLPG
LQSYTLMMKPTPLQHEILVRLHKHMNVARGFPLELELMITLGSIHPWLIKSAVCANKFLS
LEELQSLDEFRLDPTKGSKVKFVLGLVQRSIIRREKVLIFCHNIAPINLFLELFERIYGW
KKGHEVLVLQGDLELFERGRVMDKFEERGGPSKVLLASINACAEGITLTAASRVVLLDSE
WNPSKQKQAIARAFRPGQEKVVYVYQLLVNGTLEEDKHGRTTWKEWVSCMIFSEEHVDDP
SKWQAEKIEDALLREIVEEDHAKSFHMIMKNERASYENPLKVISEE
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaagaagtcttcatctggctttacatcctttcgatgatcatccctttgaggta
ttctaccaaggtatgtggaaaactgtggatagattaagaatcagttcggggactataaca
tttagcttcttggaccttggatatttgtttgaggaaaagagttttctttctaccctgagg
cttcggccaagaagagcaactttgactgactgcacctgtgtgctaagacctggtgctgat
gtttctgtgttctctacacctgatgatgcagaagaatcatccgaggaatcgcccacagga
tggtttgatgcaagaataacttctgttgagaggaaactgcatgactctgaatgcaactgc
aagttttatatcaaattctactacatcagtgatgacaatgcaggaactgacagaaaaaaa
cttagcaaggaaattgagactgttgggatcaatcaaatatccgtcttacaagttctcgag
caaaggccttcagaaaatacacattataggtggaatctggcagaagactgcacatcattg
tcgaggactaaactatttctgtctaagtttgcttctgatatatcttggcttcttgtgaca
tcagttcagaagcagactgtattcgatgtaagagcgatagaaaaaaagatagtctatcaa
atattagacaccaacttcagtccttattcaacttctgtccgtttaagtagtgtgaatttc
aggacagatggtgatattacattctcagctgttttctcatttgttccggtggacaatgaa
caagtaccgcctgtcccagaggtgaaggaggaagaggatcctctttctggatatgagctt
acagagttaaggcgatcaaaacgtcgtaatgtacagcctgagcgatacttgggtgagatt
ggtctcgaggtgactgatactactgcactcagaatagggtacaagttttggaatcaggaa
gatttggccattgtgcttgtaaataatgacgaagatagaaattctgttttagaagatcct
caacaaaatctccaacatgctattgagttatattcaggggatcgcattggagttgagaca
atagacgagaatcttgttaaagattgtactagtgatgaagacagtcaaaaacaaaagcag
cggaagcgaaaatatgtcagaaaagagaaggagaacaagaaaaagaatgctgaaaaagca
ggaagagagaaccaacttgctattgttcctctatcagatggtaacaatcaaatgccccgg
gaacaaagtcatctcctcaatgagatccgacaaaatcctctcgacattgatgatgataat
gttcctttaaagttctacaagcgaagatttagagaacggagaactacaacttcaacatca
atgtcaggacgtatgaagaaaatctcagaattagatgattatgatcatgaaccaggacat
ggaagaaggaactttagtcataaacaaaatcagaagtttaagcatcgcccttttgcttct
tccaggagtgataagcactctgaggatccgtcgagaaacaaaaagaaaccattggatatt
tctgcttacaaggaccttatatcaacttacatgaagaacatacagttgacaatagagaat
aaacagcctatttctactgatgcgtggaaaaaccttcaaggagcgtcgtctatgtatgaa
aagaaggctgctgatgaagctcgacctcccgaggaagtagaagaagaagaagagtctgaa
actgagatgttgtttagagaaatggacctttgtttagcttcagcatatttcgaagaggag
cattcaaaggctgaaaatggtgatgaaccagctgagaaattcttcaaaaatgatggatct
tgtcagcatgtgttcaccatagatgatgagatcgggattctatgccggttgtgtggatat
gtaatcaccgagatcagagatgttacaccgccatttatgcgacaatcaggatttacagca
aagcatgacagatatgataacaagactgaaaaagatgatactgagcataagctgctggat
gaggcctgtgctgatcttgtctataatcccgcctcctatgagactcttgtgtccgaatca
aacgacaatgtctggggtctaatcccaagtataaagaagaaattacatgatcatcagaag
aaagcatttgagttcctttggagaaatcttgcagggtctttgataccttcagaaatggaa
ccatcaagcaagaaagttggtggttgtgtaatttctcatgctcctggtgcggggaaaact
tttcttatcatcgcattccttgtaagttacttgaagctattcccaggaaagcgaccttta
gttcttgcaccgaaaacgacactttatacatggtacaaggagattataaagtgggaattt
ccggttccagtgtatcaaatacatggccgaagaacctacagagatagaatttacatgcaa
aaagtcgggactgcttcatcaagtcttgtaccaaatggagatatcatgcatgttcttgat
tgcttggagaagatacagaagtggcatgctcaccctagtgttcttctcatgggttacacc
tcctttttatcacttatgcgagaagactctaagtatgctcatcgtaggtatatgggtcag
attctgcgggaaagtccagggattttgatacttgatgaaggacacaacccgagaagcaca
aagtcgaggctgaggaaagctttaatgagggttgacacagaattcagaattttactctca
ggaactttgtttcagaacaactttggtgagtattttaacaccctttgcttggcaaggcca
aagtttgtcgatgaggtgcttcgagtgcttgacccaaagtataagaagaaaataaagggg
cagaataaaactcgaacttccattgaaaaccgtgccaggaaggttttcatggacatcatt
gcaaggaagataaactcaagcgagacagaagagagagctgatggcctaaacatgttgaag
aacatgacaaacaagtttattgatgtatatgaaggcggaggctcagaaaacctgcctggc
cttcagagttatactctgatgatgaagccaactcctttgcagcatgaaattcttgtgaga
cttcacaaacacatgaatgtggctcgaggatttcccttagaactcgagctcatgatcacc
ctaggatcgatccatccatggttgatcaaatctgctgtttgtgcaaacaagtttcttagc
ttggaggagctccagagcctcgacgagtttaggctggaccctacaaaagggtcaaaggtg
aaatttgtccttggactggtccaaaggtctataataaggcgagagaaagttttgatcttt
tgccacaacatagcaccaattaacctctttcttgagctttttgagagaatttacgggtgg
aagaaaggtcacgaggttctagtccttcaaggggatctcgagctttttgaaagaggaagg
gtgatggataaattcgaggaacgtggagggccatcaaaggtattactcgcttcaatcaat
gcttgtgctgaaggtattactttgacagctgcctctagggtggtcttattggactctgaa
tggaacccctcaaagcaaaagcaggccattgctcgagcttttaggcccggtcaagagaag
gtggtgtatgtttatcaactattagttaatggtactttagaagaagataagcatggtaga
acaacatggaaagaatgggtttcttgtatgatatttagtgaagaacatgtggatgatcct
tccaaatggcaagcggagaagatcgaagatgcgttattgagagaaattgttgaggaagat
catgctaagtctttccacatgattatgaagaatgaaagagcttcttatgagaatcctttg
aaggtgatcagtgaggaataa
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