KEGG   Chenopodium quinoa (quinoa): 110721402
Entry
110721402         CDS       T05764                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110721402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110721402
   03036 Chromosome and associated proteins [BR:cqi03036]
    110721402
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110721402
 Complex B
    110721402
 Complex C
   U2 SnRNP specific factors
    110721402
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110721402
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N UME
Other DBs
NCBI-GeneID: 110721402
NCBI-ProteinID: XP_021756230
LinkDB
Position
Unknown
AA seq 1276 aa
MASIDPEIAKTQEERKKMEQELASLSSLTYDTDLYGSSGREDYVQSIPVDDDEDNTDAMD
NEVARKLASYTAPKSLLKEMPGVGADYDDGLRKPQRIIDREDDYRRRRLDRVISPARHDA
FAMGDKTPDVGVRTYADVMREEALRREKEETFRLIAKKKKEEEEQKKSLEEEKGAAGGVA
AQAQPSQKRRNRWDQSQDQQGDEGVAKKPKSSSDWDLADSTPGIGRWDATPTPGRLGDAT
PSARKNRWDETPTPGRVQDSDATPSAGGLTPGATPAGSTWDATPKITGMATPTPKRQRSR
WDETPATMGSATPMAGATPAAMTPGVTPVGGVDMATPTPGQINLRGPVTPEQYNLMKWEK
DIEERNRPLTDEELDSMFPPEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYQIPVED
RNQQFDVGKEPANGLPFMKPEDYQYFQALLNDENEEELSPEEQKERKIMKLLLKVKNGTP
PQRKTALRQLTDKAREFGAGPLFNQILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP
FVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA
RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI
IEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA
IGFIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSD
ILPEFFKNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVM
ETIEKVVTNLGASDIESRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPY
LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPE
VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN
RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA
VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVIN
AVTEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLE
NEGENIYSRPELLMFV
NT seq 3831 nt   +upstreamnt  +downstreamnt
atggcgtcgatagacccagagatagcgaaaacacaggaggagaggaagaagatggagcag
gaactagcttctctttcatctcttacctatgatactgatctttatgggagtagtgggagg
gaggattatgtccagtcaatccctgttgatgatgatgaagataatacggatgctatggat
aacgaggtggctcggaaattggcttcttatacggctccgaagtctcttttaaaggaaatg
cctggtgttggggctgactatgatgatgggttgaggaagccacaaaggattattgatcgt
gaggatgattatcggaggaggaggcttgatcgggttatttctcctgcgaggcatgatgct
tttgcgatgggggataagaccccggatgttggtgtcaggacttatgctgatgtgatgagg
gaggaggcactgaggagagagaaggaggagacgttccgattgattgctaaaaagaagaaa
gaagaggaggagcagaagaagagtttggaagaggagaaaggagctgctggtggtgttgct
gctcaagctcagccttctcagaagaggagaaataggtgggatcagtctcaggatcagcaa
ggggatgagggcgtagcaaagaaaccgaagtcttcctctgactgggatttagccgattct
acccctggaattggaaggtgggatgccactcccacaccggggagacttggtgatgctaca
ccatctgctcggaagaataggtgggatgagacaccaacacctggtcgtgttcaagattct
gatgctactccgtctgctggtgggctcactcctggtgccactcctgctggatcaacgtgg
gatgccactccaaaaatcactggtatggcaacaccgacacctaaacgtcagagatcaagg
tgggatgagactccagctaccatggggagtgcaacacccatggctggggcaactcctgcg
gctatgacccctggtgtgacacctgttggtggggttgatatggctacacctactcctggg
cagattaatctgcgtggccctgtaactcccgaacagtataacttgatgaagtgggagaag
gatattgaagagaggaacagacctttgactgatgaagagcttgattccatgttcccacct
gaagggtataagattttggatcctcctgcttcatatgtgccaattaggaccccagcaagg
aagcttcttgccacacccactccaatggggactccactttatcaaataccagttgaagac
aggaatcagcagtttgatgttggaaaggagcctgctaatgggctgccatttatgaaacca
gaggactatcaatattttcaggcgttgttgaatgatgaaaacgaggaagagctgtcacca
gaggagcagaaggaaagaaagattatgaagttgctacttaaagtgaaaaatggtactcct
cctcagaggaagactgcattacggcaactcactgacaaagcaagagaatttggtgctggt
ccgttgtttaaccaaattttgcctttgcttatgcagccgacattggaggaccaagaacga
catcttcttgtgaaagttattgacagggtactgtacaagcttgatgagttggttcggcct
ttcgtgcacaaaattcttgtggttattgagccactcttaattgatgaagactactatgcc
cgtgttgaggggagggagattatttcaaacttgagtaaggctgctggattggccactatg
attgctgccatgaggccggatattgataatattgatgagtatgtcaggaatacaaccgca
agggcttttagtgttgttgcttcagctctaggtatacctgctctgctgccatttttaaag
gcagtgtgtcaaagtaagaagtcatggcaagctaggcatacaggtatcaagattgtccaa
cagattgccattttgattggttgtgctgttctgccacacttaagatctttggtggagatc
atagaacatggtcttaatgatgagaaccagaaggtcagaacaattactgcactttctctg
gcagctctagctgaagcttcagccccgtatggtattgagagttttgactctgtattgaaa
cctctgtggaaaggtatcagatcacaccgtggaaaggtcttggctgcattcctgaaggcc
attggttttatcattccgttgatggatgctctttatgctagctactatacaaaagaagtt
atgtttattctaattcgagagttccagtcaccagatgaagaaatgaagaagattgttctg
aaagtggtgaagcagtgtgttagcactgagggtgtagaggctgactacattagaagtgat
atccttcctgagttctttaagaacttttgggttaggagaatggctcttgacagaagaaac
tacaagcagcttgtggaaactactgtagagatagccaacaaggttggtgttgctgatata
gttggtaggatagtggaggatcttaaagatgagagtgaaccctataggcgtatggtcatg
gagacaatagagaaagtggtgacaaacttgggggcatctgatattgaatctcgcttggag
gagcttctgattgatggtattctgtatgcctttcaggagcagacaagtgatgatgccaat
gtcatgcttaatggttttggcgctgtggtcaatgccctcggccaaagggtcaaaccttat
ctcccccagatatgtggtacaattaagtggcgtttgaataacaagagtgcaaaagtaagg
cagcaggctgctgaccttatctcccgaattgcagtggttatgaagcagtgtggagaggag
cagcttatgggtcacttgggtgtggttttgtatgagtatctaggagaggagtatccagaa
gtgctgggttcaatcttgggagcactgaaagcaattgttaacgtcattggtatgaccaag
atgactccaccaatcaaagacctgctacctaggttgactcctattttgaagaacaggcat
gagaaagtacaggagaactgcattgatcttgtggggcgtattgcagatcgtggagcagaa
tttgttcctgcaagagagtggatgagaatatgctttgagcttctggagatgctcaaggct
cacaagaaaggaattcgaagagccactgtcaacacctttgggtacattgccaaagctatt
ggacctcaggatgtcttggctactcttcttaacaaccttaaggtgcaagaacgtcagaac
cgtgtttgtacaaccgtggctattgcaatcgttgctgagacttgctcacctttcaccgtt
ttgccagctcttatgaatgaataccgtgttcctgagcttaacgtgcagaatggtgtcctc
aaatctctgtctttcctctttgaatatattggtgaaatgggaaaggattatatctatgcc
gtgactcctctccttgaagatgcccttatggaccgggacctggttcatcgtcagactgca
gcttctgccgtgaaacatatggctcttggtgttgcaggtctaggctgtgaagatgctttg
gtgcaccttatgaattacgtgtggcccaatatcttcgagacttcacctcacgttatcaat
gctgttacagaagccattgagggaatgagagttgcattgggtgctgctgcaatactgaac
tactgtctgcagggtttgttccacccagcaaggaaagttagggaagtctactggaagata
tataattctctgtatattggagctcaggatgctcttgttgctgcttatccgactttggaa
aatgaaggagaaaacatctatagtagacccgagttgttgatgtttgtgtaa

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