KEGG   Capsella rubella (pink shepherd's-purse): 17887531
Entry
17887531          CDS       T02984                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X2
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    17887531
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:crb01001]
    17887531
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crb03032]
    17887531
   03036 Chromosome and associated proteins [BR:crb03036]
    17887531
   03400 DNA repair and recombination proteins [BR:crb03400]
    17887531
Enzymes [BR:crb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     17887531
Protein kinases [BR:crb01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   17887531
DNA replication proteins [BR:crb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    17887531
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    17887531
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    17887531
SSDB
Motif
Pfam: PI3_PI4_kinase FAT FATC TAN
Other DBs
NCBI-GeneID: 17887531
NCBI-ProteinID: XP_006290480
UniProt: R0HHU5
LinkDB
Position
Unknown
AA seq 3020 aa
MVSSRDVHEIVSKLSSDKAKTREDGVKLLNTWLEGERSITFCRFLSQNTAKLKLDEIPNA
ETWPFLVKLLLQCVSMEVSGSKRRLPKPTFAKTLRVVIQRTEETRFPGVHCPLLSMAKTL
FTHVHDTLSNTPSFQSEYGTILRHLLEISDYRFQMRKRTYSSLVLLYMERVEAGFCEKNT
GQHSQKEEAFRHILTLQSLLENLPGDFPDDLREEIVNGIIHIFSFVRDEGKLSRKLIECV
NTFLLKDGPNLGSLLLEIHNAVEKFVFRCWLTTHDKNLKEILVFYGRLQLNLTRGASQSS
SLVEQLFDVVTRELDLGSSLSSAAWGDSTKDDKLGALSTYQTSLIELAAHVFYQACVKTS
RPSVSEKRARRQPVALRLLEALTEGKWLWCAAFGCLVRTYCTRINKDLLIYWFEAICTNF
QRLLEDASMRHSYDGLLWTLRSLQGLSSGLLLSDTTQDISKSSISSSELDRGWQLIWSSL
IHGLATFSSTSVIVDAVLVLLGSVISSHHINVGVLPQEVWDHQLFRHIPSEPALYFIACY
FSRMGCQGNLQDDLHLRRNILRAVCAPLSWKGRLTLNERMIELLPAAAFSLCAGFKTSLP
VPKEHLPTPSEWDVYEQIDDVEQERKFGLFECSVEALARLRSNSTKITSCQVPDVVQLPL
VLRDPLLHDMDIYFLSIIPEENEKGPLSDIFMGCALLCHFMHGSYITRKGNGSSSFLLKA
CQYLLEGLDHAAEAVLKSLSDLQRLGPLGFTSDFNEKGSIIVSLRSLIKSPVFSNRRDQN
IFGASYDAVIYSLENLLRAFAKVYGEYTEHTWNTQSNTIPLKSLELDSPEVCRIVDMDLD
LAEDTKEMDIINASGKAVPGLSVSTGNWKLGMISLISCFSPVLQFPTWDVLYNLLEKECD
PKVLENILYHLCQLSCLTSMPKVNELVMFLDGMLSTQVKIKRNCLNIVTALHVLLRTLSS
SGMGSSGFRKNCDFSLKEGENCQVFVQLGAIVNKVSEFGLLGWFGRVKLIYCICDLVLLH
PQTGQTMIERLLLMLNDPDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGIILVTSSK
EKLITARDVLAAGPQPAPKMETVIITLMHLAYHSENIELQAVFMMCAVSAIDPCQRELII
AALDNLSVQLCYPSRFKYLEELLGPILFFWISCGVSLAGLVETRQLFIPNTEPKYFIHFC
SHWLLPALLLHEDHTNLEWVAKMAGQPVVVLVKENFVPIFSICMGLHCSKTSECDKGAMV
LQNSILYVGEISENERDKLIKQNMVSIVSFILSCTSSSSEPTVPVFSRDTISLAVQTVVD
GFLEIADYPKKEAITDRINIFRPDRVFMFITEMHYRMSAACHHRHTRHHLAALEELTILL
GHRALVPSSLNYIFNLVGQFIGYPSLQDQCCSIASCLLDSFKSNPAKEIVSVLGDQLQYL
VSKLVTCCINAEADTKVSASKSSQLVNLLHKLVVNSDSALNEDIRDLELFPDMESLQVIR
KSHIKICEAYSPRNHLLKCARRSCYLPPRFLSRSLQALHNKLIASGDSQEETNVETAEAF
WQSDDEIVKAVWTLVRVSSSDEADNMRLFVSDFLSRVGIRNPHTVVFRLPGELGTMHDRQ
CVSHTTGSKVRSFTENGISDETLIALLKILKKYLLDDSVKTIDVTSQTLRGILSTERGQQ
ALSSFNSCERASIEVHGRGVNHDIVEKILLDSQMQFKADSFSLEKSEVWSTYNKNFDRWI
CQLVYCMIALCEDVPIRLCQSIAMLKAEISELLFPSVIVSLAGRIGTDIDLHNLITSQVK
EHIFIDSNKLTKSKQIMLNTLNELRKCYVLERSIFSGQTKKEKNAKHSSYSSRSCSTAAK
IRDVETSPNGMAASITTNWEKVYWLSIDYLVVARSAVVCGAYLTASMYVEYWCEEKFGNL
SLGDPDFSYHDMLPDHVEILVSAITKINEPDSLYGVIHSNKLSAQIITFEHEGNWTRALE
YYDLQARSQKTVVSCSLSENLEVERLQPTTSAHHSVFGEGEVQRQPFKGLIRSLQQTGCM
HVLDMYCRGLTSREGYFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHCQPLQHVKNNNYH
ENLHCCLRSFQEGDYDGFYGKLKDTKKELVLSISRASEESTEFIYSTVVKLQILHHLGLV
WDLRWKTSSHQSVHDYPVKQMASTDPVTPTMDQLSWLNKDWNSIITQTQLHMNLLEPFIA
FRRVLLQILGCEECTMQHLLQSASLLRKGTRYSHAAASLHEFKFLCARSDGKQSVPDWLG
KLEEAKLLHAQGRHEVSISLASYILHNYQLKEEASDIYRVIGKWLAETRSSNSRTILEKY
LRPAVSLAEEHGSKICKRLVDRQSQTWFHLAHYADALFKSYEERLSSSEWQAALRLRKHK
TKELEVLIKRFKSSKKAEQSDYSLKIQDLQKQLTMDKEEAEKLQVDRDNFLKLALEGYKR
CLEIGDKYDVRVVFRQVSMWFNLASQQNVIDNMLSTINEVQSYKFVPLVYQIASRLGSSK
DESGSNSFQSALVSLIRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDTDKKLAA
EHLLHDVSRHHGPMIRQMKQLVDIYIKLAELETRREDTNRRVALPREIRSVKQLELVPVV
TATIPVDRSCQYNEGTFPFFRGLSDSVTVMNGINAPKVVECFGSDGQKYKQLAKSGNDDL
RQDAVMEQFFGLVNTFLHNNRDTWKRKLAVRTYKVIPFTPSAGVLEWVDGTIPLGDYLIG
SSRSEGAHGRYGVGNWKYPKCREHMSSAKDKRKAFVDVCTNFSPVMHYFFLEKFLQPADW
FVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPER
VPFRLTRDIVDGMGITGVEGVFRRCCEETLSVMRANKEALLTIIEVFIHDPLYKWALSPL
KALQRQKETGDFEGMNLEGLQEEFEGNKDATRALMRVKQKLDGYEGGEMRSIHGQAQQLI
QDAIDTDRLSHMFPGWGAWM
NT seq 9063 nt   +upstreamnt  +downstreamnt
atggtttcttcaagagatgtccatgagattgtctccaagctctcgtcggacaaagccaag
actcgcgaagatggtgtcaagttattgaatacatggctcgaaggggaaaggtcaattacc
ttttgtagatttctttcacaaaacacagctaagctaaagttggacgagattccaaatgct
gaaacgtggccctttttggttaaacttctccttcaatgtgtctcaatggaggtgtcaggt
agtaagagacgtttgcccaagccaactttcgcaaagacgcttcgagttgttattcagaga
acagaagaaactaggtttcctggtgtacattgtcctttgctatctatggctaaaaccctc
tttacacatgtacatgataccttgagcaacacaccaagctttcagtctgagtatggtacc
atactccgccatcttttggaaattagtgattatcgtttccaaatgaggaagcgtacatat
tccagtttggtgctgctatacatggaaagagttgaggcaggattttgcgagaaaaacact
ggtcaacatagccagaaggaggaagcttttcgccatattcttacgcttcagtcactttta
gagaacctccctggagattttcctgatgaccttcgagaagaaattgtgaacggcatcatt
catattttctcttttgtaagagatgagggaaagctttcacgcaagcttattgaatgtgta
aataccttcttgctgaaggatggtcctaatttaggctctttgttattggaaattcataat
gcggttgaaaaatttgtattccgttgctggttaacaacccatgataagaacctcaaggag
atacttgttttttatggaaggctacagctaaatttgacaaggggtgctagtcaatctagt
tctctggtggaacaactttttgacgtggttactcgtgaattggatctgggtagttcatta
agttctgcagcatggggggattcaaccaaggatgataagttaggggcattgagcacctat
caaactagcttgattgagctggctgcacatgtgttctaccaggcatgtgtcaaaacatct
cgaccatcagtatcggagaaacgagctcggaggcaacctgttgcattgcggctattggag
gcactaactgaaggaaaatggctatggtgtgctgcttttggttgtctagttcggacttat
tgtacccgcatcaataaggatctccttatttactggtttgaagccatctgcacaaacttt
cagagacttttggaggacgccagtatgcgacattcttatgatggtctactatggactttg
aggagtttgcaagggctctcttcaggattgttactttcagatactactcaagacatatca
aagtcatctatatcctcaagtgagctagatcgtggttggcaattgatctggagttcttta
atccatgggctagcaacattcagcagcacgagtgtaattgttgatgctgtcttggtgctc
cttggatcagttatttccagtcaccacataaatgttggggttctgcctcaagaagtgtgg
gatcatcaattattcagacacataccttctgagccggccttgtacttcattgcatgttac
ttttcacgtatgggttgccagggaaatctgcaagatgatttacatcttcgacgtaatatt
ctcagagcagtttgtgcccccctaagctggaagggtcgtttgacactaaatgagagaatg
attgagcttctaccagcagctgctttttccttatgtgctggtttcaaaacttcacttcca
gtacctaaggaacatcttccaacaccatctgaatgggatgtttacgaacagatagatgat
gttgagcaagaaagaaaatttggactctttgaatgttccgtggaggctctagcaagactt
cgctcaaattctaccaagatcactagctgccaagttcctgacgttgtacaactacctctg
gtactaagagatccattgcttcatgacatggatatctattttcttagcattatccccgag
gaaaatgagaaaggaccactgtctgacatctttatgggatgtgctctgctgtgccatttt
atgcatggttcttatatcacaaggaagggtaatggaagcagttcgttcttattaaaagca
tgccagtatttgttagaaggcctggatcatgctgccgaagcagtattaaagagcctcagt
gatcttcaaaggcttggtcccttggggtttacctcagattttaatgagaaaggttctata
atagtttcgttgaggtcccttattaagtctcctgtcttcagcaacagaagagaccaaaat
atttttggcgctagttatgatgctgtaatttactccttagagaatcttttgcgggctttt
gctaaagtctatggagaatatactgagcacacatggaatacccaatccaacactatacct
ttaaaatcgttagagcttgattccccagaagtttgcaggatagtggatatggatttagat
ttagctgaagacactaaagagatggatattataaatgccagtggaaaagctgtacccggc
ctgtccgtttccacagggaactggaagttgggcatgatatcacttatctcatgtttttct
ccggtacttcagtttcctacatgggatgttctatataatctcttggagaaagaatgtgat
cctaaggtgctggaaaatatactgtatcatctatgccagctttcatgcttgacttctatg
ccgaaggttaatgaattggttatgttcttggatggcatgctaagtacacaagtaaagatc
aagcgtaactgtctgaatatagtcactgctctgcatgttttacttcgcactttatcatcc
tcggggatgggttcttctggattcagaaaaaactgtgatttttctttaaaagaaggagaa
aattgtcaggtctttgtccaacttggcgcaatagtgaataaagtctctgaatttggtctc
ttgggatggtttgggcgtgtcaagctgatctactgtatatgtgatcttgtgttgcttcat
cctcagactggtcagacaatgattgagcgacttctgttaatgctaaatgaccctgattat
cgagtgagatttgtcctggcaagacaaattgggattttattccagacgtgggatggccat
gaggcattgttccaagatatttgctccagctttggaattatattggtaacctcctcaaag
gaaaaactaatcactgcaagggatgttttggctgctggtcctcagcctgccccgaaaatg
gagactgtcatcattactcttatgcaccttgcttatcacagtgagaatatagagttgcaa
gctgtttttatgatgtgcgctgtttcagctatagatccttgtcagagggaattaatcatt
gctgcgcttgacaatctatcagtacaactctgttacccatctcggttcaagtacctggag
gaactcttgggcccaatcctctttttctggatttcgtgtggtgtcagtttagctggtctt
gttgagacaagacagctgttcattccaaacactgaaccaaaatatttcatccacttttgc
tcccactggctacttccggctcttctgttgcatgaagaccatactaaccttgaatgggta
gctaagatggctggccaaccggtggttgtgttggtcaaagaaaattttgtgccgatattt
tcgatatgtatgggattgcactgtagtaaaacgtcagaatgtgataaaggtgcaatggtg
cttcagaattcaatattgtatgttggtgagatcagcgagaatgagagggataagctgatt
aagcagaatatggtgtctattgttagttttattttatcatgcacttcctcttcatcagaa
cctacagttcctgttttttctcgtgacacgatatcacttgcagttcaaacagtcgtggat
ggttttctggaaattgctgattatcctaagaaagaggccataactgacaggataaacatt
tttcgcccggatagagtgttcatgttcatcacagaaatgcactatagaatgtcagctgca
tgccatcatcggcatacacgtcatcatttggctgcacttgaagagcttactattcttctt
ggtcatagagctttagttccaagttccttaaattacatattcaatcttgttggacaattt
atcggctatccctcattacaagaccagtgttgtagtatagcctcctgtttgctggattcg
ttcaaaagcaatccggccaaagaaattgttagtgtactaggtgaccaactccagtatttg
gtctcaaagctggttacatgttgcatcaatgctgaagcagataccaaagtttctgcttct
aagtcatctcagcttgtaaatctgctacacaagctagttgttaattcagattctgctctt
aatgaagatatcagagatttagagttattccctgatatggaaagtcttcaagtcattcgt
aaatcacacatcaaaatatgcgaagcatattctccgagaaatcatctgttgaagtgtgct
agaagatcttgttatcttccaccaaggttcctttccaggagtctccaagcattgcataac
aagctcatagcttctggagattctcaagaagagacaaatgttgaaactgcagaagcattt
tggcagtctgatgatgaaattgtgaaggctgtttggactcttgtccgtgtgtcttcttct
gatgaagcagataatatgagactttttgtgtctgattttctttccagggttggtattagg
aacccgcacactgttgttttccgtcttcctggggagctggggaccatgcatgatcgtcaa
tgtgttagccatactactggatcaaaagttagatcttttactgagaacggcatatccgat
gaaactcttattgcactcctgaaaattctgaagaaatatcttttggatgactctgtaaag
actattgatgtaacatctcaaactcttcggggaattctttcaaccgaaagggggcagcaa
gcattatcatctttcaattcatgcgagagagcttccattgaggtgcatggcaggggggtg
aaccatgacattgtagaaaagatcttactggatagtcaaatgcagttcaaagctgatagc
ttttctctggagaagtccgaagtttggtccacatataataaaaactttgatagatggatt
tgtcagcttgtgtactgtatgatcgctttatgtgaggatgtcccgataaggttatgccag
agcatagcaatgctgaaggctgaaatctctgagcttctattccctagtgttattgttagt
cttgcgggaaggatagggacggatatcgatttacacaatttgattacatcacaggtgaaa
gagcatatcttcattgattcaaacaagctaacaaaatcaaagcaaattatgttaaatacc
ctgaatgaactgcggaagtgttatgtgctcgaaagatcgattttttctggacaaactaag
aaagaaaagaatgctaagcattctagctacagttcaagatcttgttctacagctgctaag
attagagatgtggaaacatcaccaaatggaatggcagcgtcaataactacaaactgggaa
aaggtttattggctttccattgattatcttgttgtagcaagatcagcagtagtgtgtggt
gcatatttgaccgcctccatgtatgtggagtattggtgtgaggagaaatttggcaattta
agtctcggggatcctgatttttcttatcatgacatgttgccggatcatgttgagatactt
gtgtctgcaataacaaaaataaatgagcctgacagcttgtatggggttatacattcaaat
aagttgtctgctcaaataatcacattcgagcatgagggaaactggacaagggcacttgag
tattatgacttgcaagcacgttcgcagaaaacagtggtgtcatgtagcctttctgaaaat
ctagaggtggaacgattacagccaacaactagtgcacatcattctgtttttggtgaaggg
gaggtccagagacaaccgttcaaaggactcataaggtcgttgcagcagacaggctgtatg
catgtcctggatatgtattgtcggggcttgacttcacgtgaaggatacttccagtatgat
ccagaattcatcgaattgcagtatgaggctgcatggcgtgcaggcaaatgggatttttct
ttactttatccgcaaacacactgccaacctctgcaacatgtcaagaacaataattatcat
gaaaatctgcactgttgtttgagatcatttcaagaaggggactacgatgggttttatgga
aaactaaaggatactaagaaggaacttgtgttgtccatttcccgtgcaagcgaagaaagc
actgaatttatatactcaacagtagtgaaacttcagattcttcatcatcttggactagtt
tgggatcttcgctggaagacatcttcacatcaaagtgtgcatgactatccagtgaaacaa
atggcatcgacagaccccgtgactcctacaatggatcaattgtcttggctgaataaggat
tggaactctattattacgcaaactcagttgcacatgaatttgttggagccattcatcgca
tttaggcgagtacttctccaaatcttgggatgtgaggaatgtaccatgcaacatcttttg
cagtctgcttcattacttcgcaaggggacaaggtattctcatgcagctgcgtcgctgcat
gagttcaagtttctttgcgcaagaagtgatggaaaacaatccgttccagattggcttgga
aagcttgaagaggcgaagctattacatgcccaagggaggcatgaagtttccattagtctt
gcaagctacattttacataactatcaattaaaagaagaggcttcagatatatatcgtgtg
attggaaaatggctagcagaaaccagatcgagcaattctagaacaattttagagaagtat
ctgaggcctgcagtttcgctcgctgaagaacacggttccaaaatctgcaaaaggttggta
gatagacagagccaaacgtggtttcatttggctcattatgcagatgctctatttaagagt
tacgaggaaagactctcctccagtgaatggcaagctgctttgcgactacgaaaacacaag
acaaaagagttggaggtgcttattaaacgctttaagagttcaaagaaggcggagcaatct
gactattcactgaagatccaagatctgcagaagcaactaacaatggataaagaagaagca
gaaaaactgcaggttgacagggacaattttctgaaacttgcattggaggggtataagcgc
tgtctggaaattggtgacaagtatgatgttcgagtggtatttcgacaagtatccatgtgg
ttcaatcttgcctcccagcaaaatgttattgataacatgttgagcaccattaatgaggtt
caatcttacaaatttgttccacttgtttatcaaattgcttcaaggttgggcagttccaaa
gatgaatctggatctaacagctttcagtctgctctggtgtcacttatcagaaaaatggcc
attgatcatccgtaccatacgatcttacagcttctggctttggcaaacggtgaccgtatc
aaggataaccaacgcagtagaaattctttcgtggttgacacggataaaaagcttgcagca
gagcatctcttgcatgatgtatcacgtcatcatgggcctatgattagacaaatgaaacag
ctggtagatatctacatcaagcttgcagaacttgaaacaaggagagaggataccaataga
agggtagcactaccaagagaaattcgtagtgtgaaacaattggaacttgtacctgtagtc
actgctacgattcctgtcgatcgtagctgccaatacaatgaaggaacgttcccctttttc
agaggtttatcagattcggttacagtgatgaacggtataaatgctccaaaagtagttgaa
tgctttggttctgatggccaaaaatataagcaacttgcgaaatctggcaatgatgacctt
agacaagacgctgttatggaacagttttttggcctcgtcaatacctttctacacaataac
agggacacatggaagagaaaattagctgtgcgcacgtacaaggttattccttttactcca
agcgctggtgttcttgagtgggtcgatggcacaattccacttggagattatcttatagga
agctcaaggagtgagggtgctcatggtcgttatggcgttggaaactggaaatatcctaaa
tgccgagaacatatgtcgagtgcaaaggacaagcgcaaagcctttgtggatgtctgcaca
aacttcagtcctgtcatgcattacttctttctggaaaagttcctgcagcctgccgactgg
tttgtgaagaggcttgcttatacgcgtagtgttgcagctagctcaatggttgggtacatt
gttggtcttggtgaccgtcatgccatgaatattttgatcgatcaagccaccgcagaagtt
gtccacatagatcttggagttgcctttgaacaaggattgatgctcaagactcctgaaagg
gttccgttcagactgacacgagacatagttgatggaatgggcatcacaggagtggaaggc
gttttcaggagatgttgcgaagaaaccctgtctgtgatgcgagcaaataaagaggcgctt
cttacaattatcgaagtttttattcatgatcctctgtacaaatgggccttgtcccccttg
aaggctttgcaaagacagaaggaaactggagattttgagggcatgaacttggaagggtta
caagaggaattcgaggggaacaaggatgctacgcgtgccttaatgcgtgtcaagcagaaa
cttgatggctatgagggtggtgagatgagaagcatacatggccaggcacagcaactaata
caagatgcaattgacacagatcgtttatcccatatgttccctggctggggagcttggatg
taa

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