Capsella rubella (pink shepherd's-purse): 17890671
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Entry
17890671 CDS
T02984
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03030
DNA replication
crb03410
Base excision repair
crb03420
Nucleotide excision repair
crb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
17890671
03410 Base excision repair
17890671
03420 Nucleotide excision repair
17890671
03440 Homologous recombination
17890671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17890671
03400 DNA repair and recombination proteins [BR:
crb03400
]
17890671
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
17890671
DNA replication proteins [BR:
crb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
17890671
DNA repair and recombination proteins [BR:
crb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
17890671
NER (nucleotide excision repair)
GGR (global genome repair) factors
17890671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
17890671
NCBI-ProteinID:
XP_006296787
UniProt:
R0HW86
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGVSLRHLSPSSFWVTRRPRVSSSILSFLVPRRRIICRKIAITNGNSGYSTATDCGGSHG
FQLSGHQRSSSVEFCGEWKLNLGSKTARMVPPTVKQAGTVSAWREEANKFRGRNEEHANN
QDDAFSKGSYSFKGFVPKIDDVQSYGNGQNFDYKLKPGSDITTLDRELNGFMPTNSIRGP
VIALPSKDIEVEGKTDVTLKGDKDAHGKQKPLQSELSLDNASYKKSATISKVEKGTDLSK
VRANLKKIYKRVLVIDDVYTAKETVAKLMNEYRNLVHACDTEVSRIDVKTETPVDHGEMI
CFSLYCGSEADFGDGKSCIWVDVLGENGRDILAEFKPFFEDSSIKKVWHNYSFDNHIIRN
YGIKLSGFHGDTMHMARLWDSSRRASGGYSLEALTSDPRVLGGTETKEEAELFGKISMKK
IFGKGKLKKDGSEGKLVIVPPVEELQKEDREAWISYSALDSISTLKLYESMKKQLQVKQW
FLDGNLISKKNMFDFYHEYWQPFAELLAKMEAEGMLVDRDYLAQIEIVAKAEQEIAVSRF
RNWASKHCPDAKHMNVGSDTQLRQLFFGGISNSCNEEDLPYEKLFKVPNVDKVIEEGKKK
ATKFRNIKLHRISDHPLPTEKFTASGWPSVSGDTLKALAGKVSAEYDYMDGISDTFLEEN
SGDDDFVSLPDEILETQHSDTSVESDTSAYGTAFDAFGGGETGKEACHAIAALCEVCSID
SLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFI
ASPGNSLIVADYGQLELRILAHLTRCKSMMEAFIAGGDFHSRTAMNMYPHIREAVENGEV
LLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAVGLSRDWKVSREEAQDTV
DLWYNDRQEVRKWQELRKKEAIQKGYVLTLLGRARKFPVYSSRAQKNHIQRAAINTPVQG
SAADVAMCAMLEISKNQRLKELGWKLLLQVHDEVILEGPSESAETAKDIVVNCMCKPFNG
KNILSVDLSVDAKCAQNWYAGK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctcttcgtcacctctctccttcctctttctgggttacgcgtcgtcctcgt
gtttcttcttcaattctttcttttcttgtgcctcgccgtagaatcatttgcaggaaaata
gctatcaccaatggaaattccggatattccactgctactgattgtgggggttcccatgga
tttcagctttcgggtcatcaacggtcgtcctctgttgagttttgtggagagtggaaactt
aatttgggatctaagacggcaagaatggttccgccaactgtgaaacaagctggaactgta
agtgcttggagggaggaagccaataagttcagaggaagaaatgaggaacatgctaacaac
caggatgatgcttttagtaaaggcagttattctttcaaaggctttgtccccaaaatagat
gatgtccaatcttatggaaacggccagaactttgattacaagctgaagccaggaagtgat
attaccacgcttgatagagaattgaatggctttatgccaactaatagtataagaggacca
gtcatagcattaccaagcaaggatattgaggttgagggaaaaacagacgtgactctgaaa
ggagataaggatgcacatggaaaacaaaaacctcttcagagtgagttgtctcttgacaat
gcaagctataagaagtcagcaaccatttccaaggtggaaaaaggcaccgacctttcgaaa
gtccgggcaaacctgaagaaaatatataagagggttcttgttatcgatgatgtttacact
gcaaaggaaactgtggctaagctcatgaatgaatatagaaatcttgtccatgcttgcgat
acagaggtttccaggattgatgtgaagactgaaacacctgtagaccatggggagatgata
tgtttcagtttatattgtggatcagaagcagattttggagatggaaaatcatgtatctgg
gtagatgtccttggcgaaaatggaagggatatcttggctgagtttaagccatttttcgaa
gactcatcaataaaaaaagtatggcataactacagttttgataaccacattatcagaaat
tatggaatcaagctttctggttttcatggtgatacaatgcacatggcacgattgtgggat
tcatctagacgggcatctggtggttattcgctcgaagcacttacaagtgacccaagagtt
cttgggggaactgagacaaaggaggaagcagaattatttggtaaaatatctatgaaaaag
atttttggaaagggaaaactgaaaaaagatggatcagaggggaaattggttattgttcct
cctgttgaagagctacaaaaggaggatcgagaagcttggatttcctactcggcgttggat
tcgataagcacacttaagctctatgagagcatgaagaaacaactgcaagtgaagcaatgg
tttcttgatggaaatctaatttcaaaaaagaacatgtttgatttctaccatgaatattgg
caaccttttgctgaacttcttgccaaaatggaagcggaaggaatgcttgtagatagggat
tatttggcgcagattgagattgtagccaaagcagaacaagaaattgctgtttcaaggttc
cggaattgggcttcaaaacattgtccagatgcgaagcatatgaatgttggcagtgacacg
caattgcgtcaactcttttttggtggcatttctaacagttgtaatgaagaggatcttcca
tatgaaaaactattcaaagttcccaatgttgataaggtgattgaagaaggaaaaaagaaa
gccacaaaattccggaatatcaaactgcataggattagcgaccatcctttacccactgaa
aagttcactgcctcaggctggccctctgttagtggagacaccttgaaagccttagctggg
aaagtctctgcagaatatgactatatggatggcatttcagatacttttctagaagaaaac
tctggagatgatgattttgtttcgctaccagatgaaattttagaaacacaacactcagat
acctctgttgaatcagacacatctgcttatggaacagcatttgatgcgtttggagggggt
gaaacaggaaaggaggcttgccatgctattgccgcactatgtgaagtttgctccattgat
tccttaatttcaaattttattcttccgttgcagggaagtaatgtgtccggaaaagatggt
cgtgtccactgctccctgaatattaacactgaaactggccgcttatcggctagaaggcca
aatttgcagaaccaacctgcattggagaaagatcggtacaagatccgtcaggccttcata
gcatcacctggaaattcacttattgttgccgattatggacagctggaacttaggattttg
gcacatcttactcgttgcaaaagtatgatggaagctttcatagctggtggagacttccac
tcaagaacagccatgaatatgtatccacatattcgtgaagctgttgaaaatggtgaagtg
ctccttgaatggcatccacaacctggacaagagaagccaccagtgccattattgaaggat
gccttcgcttctgagagaagaaaagcaaagatgcttaacttctcgattgcgtatggtaag
actgctgttggcctctctagagattggaaggtttcaagagaagaagctcaagatacagtt
gatctctggtataatgacagacaagaagtccgcaaatggcaagaactacgcaagaaagaa
gctatacaaaaggggtatgtactcactttgttgggaagggctcgtaaatttcctgtatac
agttcacgtgcccaaaagaaccatatccaacgagcagcaatcaacactcctgttcaggga
agcgccgctgatgttgctatgtgcgctatgctcgagatatcaaaaaaccaacgtctaaaa
gagcttggctggaaattgcttctacaagttcatgatgaagtaattttggaaggacctagt
gagtcagcggagactgctaaagacatagttgtgaactgcatgtgtaaaccgttcaacggc
aagaatattctctcagtcgacttatctgttgatgctaagtgtgctcagaactggtatgct
ggcaaataa
DBGET
integrated database retrieval system
