Capsella rubella (pink shepherd's-purse): 17896480
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Entry
17896480 CDS
T02984
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
crb03012
]
17896480
Translation factors [BR:
crb03012
]
Eukaryotic type
Initiation factors
eIF-5
17896480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
17896480
NCBI-ProteinID:
XP_006300652
UniProt:
R0I6A0
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MGRKKPSARAGEDETQPAASSLVGATKSKKKAVKIDDDEYSIGTELSEEPKVVEEDKVVI
TGKKKGKKGNKKGAQLDDDDDFPDKLSVAEEDHVPEIAFVGKKKSKGKKGAAAAVSFALL
DDEDVKDDAEDHESDADKDDEPVISFTGKKHASNKGKKSGNSFAASAFDALGDDDDDAKD
DDEEEESPITFSGKKKKSSKSAKKTTTNSFSAALLDEEEETDALTSRPGKDEDEESPEIT
FSGKKKSSKKKGGSVLASLGDDSVADETSQAKTSETKSAEAVETGKSKKKKKNNKSGRTV
EEEDDLDKLLAELGETPAAGRPASLPPQEEKVQAQPGAVTPVENAGEKEGAEETVESAAA
KKKKKKKEKEKEKKAAASAAATSSVEAKEEKQEESITEPQQPKKKDAKGKAAEKKIPKHV
REMQEALARRQEAEERQKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEKLLRK
KQEGKLLTAKQRTEALKREAFKNQLLAAGGGLPVADNDGEATSSKRPIYANKKKSSRQKG
NDTSVLVEDEVEPKENHADERDPLGEGGSADTEKVDLIESANTDEKLETADVAQENEAKE
DDEEDEWDAKSWDTVDLNLKGDFDDEEEEAQPVVKKELKDAISKAHDSDPESEKPTAKPA
GMGKPTTAAVKAVHEEEDATRSKRATRAKDASKKGKGLAPSESLEGEENLRSPICCIMGH
VDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVI
DTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDKL
YGWQRCKNSPIVKALKQQNKDVTSEFNQKLKETKNQFQEQGLNTELYYKNKDMGETISIV
PTSAISGEGVPDLLLWLVQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGTTIDAVLVNGE
LHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHYKEIKAAQGIKITAQGLEHA
IAGTALHVVGPDDDIEAIKESAMEDMESVLSRIDKSGEGVYVQASTLGSLEALLEFLKTP
AVKIPVSGIGIGPVHKKDIMKAGVMLERKKEYATILAFDVKVTTEARELADEMGVKIFCA
DIIYHLFDQFKAYIENIKEEKKKESADEAVFPCVLQILPNCVFNKKDPIVLGVDVVEGIL
KIGTPICVPGREFIDIGRIASIENNHKPVDYAKKGNKVAIKIVGSNAEEQKMFGRHFDME
DELVSHISRRSIDILKTNYRDELSIEEWKLVVKLKNIFKIQ
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaagccgagtgctcgtgctggagaagatgagacgcaacctgctgcgtca
tctctcgttggtgctactaaatctaagaagaaggctgttaaaatcgatgacgatgaatac
tctattggtactgagctctccgaggagcctaaagttgttgaggaagacaaggttgttatc
actggcaagaagaagggtaagaaaggtaataagaagggtgcccagctagatgacgatgat
gattttcctgataagctttccgttgccgaggaagaccatgttccggagattgcttttgtt
ggcaagaagaagtccaaaggtaagaagggtgctgctgccgctgttagctttgccttgctt
gatgatgaagatgttaaggacgatgcagaggatcatgaatctgatgctgacaaagatgat
gagccagttataagttttactggtaagaagcatgcttctaacaagggtaaaaaaagcggt
aattcatttgcggcatcagcttttgatgcgcttggtgatgatgatgatgatgctaaggat
gatgatgaagaagaagagtctcctatcaccttctctggtaagaaaaagaagtcctccaaa
tctgctaagaagaccaccactaattcatttagtgctgctttgcttgatgaggaagaagag
acagatgccttaacctctagacctggcaaagatgaagatgaggagagccctgaaatcacg
ttttcaggtaagaagaaatcttctaaaaagaagggcggcagtgttttggcctcactaggt
gatgactcagttgctgacgaaactagtcaagctaaaacgtctgaaactaagagtgcggag
gctgtagaaactggaaagagtaagaaaaagaagaagaataataagagtggaaggacagta
gaggaagaggacgacttggacaaacttcttgcagaacttggagaaacccctgctgctgga
agacctgcttcattgccgccccaagaagagaaagttcaagctcagcctggggcagttaca
ccggtagagaatgctggtgagaaggaaggagcagaagagactgttgagagtgctgcagca
aagaaaaagaaaaagaagaaggaaaaagagaaagaaaaaaaagcagcagcatctgctgca
gcaacctcttctgtagaggctaaggaggaaaaacaagaagaatctataactgagccacaa
cagccaaagaagaaggatgcaaagggtaaagcagcagagaaaaagattcccaaacatgtt
agagagatgcaagaggctcttgcacggcggcaagaagcggaagagcgacaaaagaaggaa
gaagaagaaaaattgaggaaggaggaagaggagcgccggaggcaggaagagcttgaggcg
caagctgaggaggctaagcgtaagagaaaggaaaaggagaaggagaaactgttgaggaag
aagcaagagggcaagcttctaacagcaaagcaaaggactgaagctcttaagagggaggct
tttaagaatcagctcctggctgctggtggaggtcttcctgtcgcagataatgatggtgag
gctacttcatcaaagcgtcccatttatgccaacaagaaaaaatcatctcgccagaaaggc
aatgacacttctgttctggtggaagatgaggtagaaccaaaagagaatcatgcagatgaa
cgagatcctttaggtgaagggggttcagcagacactgaaaaggttgatttaatagagtca
gcaaacacagacgagaaattagaaactgctgatgtagctcaggagaatgaggctaaggaa
gatgatgaagaagatgaatgggatgcaaaaagctgggatactgttgatcttaacctcaaa
ggtgattttgatgatgaagaggaagaagctcagcctgtggttaagaaggaattaaaggat
gctatatcaaaggcacatgattcagaccctgaatctgaaaagccaacagctaaaccagca
ggtatgggcaagccaacaacagctgctgtaaaagctgtacatgaagaggaagatgctacg
cggtcaaaacgtgctacccgagcaaaagatgcctctaagaagggtaaaggtttagctccc
agtgaatctctagagggcgaggaaaatctgcggtctcctatttgctgcatcatgggtcat
gttgatactggtaaaacaaagctgttggattgcatcagaggaacaaatgttcaggaaggc
gaggctggaggtattactcagcaaattggtgcaacatatttccctgcggagaacatccga
gagaggaccaaggaactgaaagccgatgcaacactcaaggtgccaggtctattggttatt
gatacacctggccacgagtccttcacgaatctgcgatcaagaggttcaagtttgtgcgac
attgcaattttggtggttgacataatgcatgggttagagccacagaccatagaatctcta
aatctgttgagaatgaggaatacagagttcatcattgcattgaataaggtggataagcta
tatggatggcaaagatgcaagaattctcccattgtaaaggcattgaagcaacaaaataaa
gatgttacaagtgagtttaaccagaagctgaaggagactaaaaaccagttccaggagcaa
ggactcaacactgagctttattacaagaataaagacatgggagaaactatcagtattgtt
cctactagtgctattagtggggaaggggttccagatctcttgctgtggttggttcaatgg
gctcagaaaacaatggttgagaaacttacatacgtcgacgaagtgcagtgtactgtcctt
gaggtcaaagttattgaaggccatggaacaacaattgatgctgtgttggtaaatggtgaa
ctccatgaaggtgatcaaatcgtcgtttgtgggctacagggacctattgtcacaacaatt
agagcattactgactcctcatccgatgaaggagttacgggtgaagggtacttatttgcat
tacaaagaaataaaggctgcacagggtatcaagattactgcgcaggggcttgaacacgca
attgctggtactgccctgcatgtggttggacctgatgatgacatcgaggcaattaaggag
tctgctatggaagatatggagtcagttttgagcaggatcgacaaaagtggtgaaggagtg
tatgtacaagcgtctacattagggtccttggaagcattgcttgaattcttgaagacccca
gctgtaaagatacctgtcagtggtattggcatagggccggtgcataagaaggatataatg
aaggcgggagttatgcttgagaggaaaaaggaatatgctacaattttggcttttgacgtg
aaagtgactacagaggctcgggaacttgctgacgaaatgggagttaaaatcttctgcgct
gatatcatatatcatctattcgatcaatttaaggcttacattgagaatataaaagaagag
aaaaagaaggaatcagcggatgaagcagtcttcccttgtgtccttcagattttgcctaac
tgtgtcttcaataagaaagacccaatagtccttggtgttgatgttgtcgagggtatactt
aagatcgggacccccatttgtgtccctggcagggaatttatagatattggccgcattgcc
tcgattgagaacaaccacaagcctgttgactatgccaagaagggcaacaaggtggcaata
aagattgttggttcgaatgctgaagaacagaagatgtttggaaggcactttgacatggaa
gatgaacttgtgagtcacatttcgaggagatctattgacatactcaaaactaactaccgg
gatgaattatcgatagaagaatggaagctagttgtgaaactgaagaacatcttcaagata
cagtag
DBGET
integrated database retrieval system
