Capsella rubella (pink shepherd's-purse): 17898426
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Entry
17898426 CDS
T02984
Name
(RefSeq) ABC transporter B family member 10
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17898426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17898426
04147 Exosome [BR:
crb04147
]
17898426
04090 CD molecules [BR:
crb04090
]
17898426
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17898426
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17898426
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17898426
CD molecules [BR:
crb04090
]
Proteins
17898426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_16
AAA_29
AAA_22
AAA_21
DUF87
RsgA_GTPase
AAA_15
AAA
APS_kinase
AAA_14
AAA_25
AAA_30
AAA_19
nSTAND1
DUF815
AAA_28
Motif
Other DBs
NCBI-GeneID:
17898426
NCBI-ProteinID:
XP_006303653
UniProt:
R0GLC2
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MQPFGDPATEALAAATKKEKERPSVSFLKLFSFADLYDCVLMALGSIAACIHGASVPVFF
IFFGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVVILFSSWIEVACWMHTGERQAAKM
RKAYLRSMLSQDISLFDTESSTGEVISAITSDILVVQDAISEKVGNFLHYISRFIAGFAI
GFTSVWQISLVTLSIVPLIALAGGIYAFVGTGLTVRVRKSYVKANEIAEEVIGNVRTVQA
FTGEEKAVNSYQGALKNTYNYGRKAGLAKGLGLGSMHCVLFLSWALLIWYTSIVVHKGIA
NGGESFTTMLNVVIAGLSLGQAAPDISTFIKARAAAYPIIQMIERNTNVKTGRELGKVVG
DIQFRDVTFTYPSRPDVVIFDKLNLVIPAGKVVALVGGSGSGKSTIISLIERFYEPTEGV
VMLDGNDIRYLDLKWLRGHIGLVNQEPSLFATTIRENIMYGKDDATADEITHAASLTEAV
SFINNLPDGFETQVGERGIQLSGGQKQRIAISRAIMKNPSILLLDEATSALDAESEKSVQ
EALDRVMVGRTTIVVAHRLSTVRNADIIAVVGGGKIIESGSHDELISNPDGAYSSLLRIQ
EAARPNLNHTPSLPISTKPSPELPITKTDLFTVHQHVKQPDTSKHAKVTLGRLYSMIRPD
WKYGFCGTLGSFVSGAQMPLFALGISDALVSYYMDWDTTRNEVKRISILFCCASVITVIS
HIIEHTSFGIVGERLTLRVRQKMFTAILRNEIGWFDKVDNTSSMLASRLESDATLLKTIV
VDRSTILLENLALVVTSFIISFILNWRLTLVVLATYPLIISGHISEKLFMQGYGGNLSKA
YLKANMLAGESISNIRTVAAFCAEEKVLDLYSKELLEPSKRSFRRGQVAGILYGVSQFFI
FSSYGLALWYGSISMEKGLSSFESVIKTFMVLIVTALVMGEVLALAPDLLKGNQMVASVF
ELLDRRTKVVGDTGEELSNVEGTIELEGVYFSYPSRPDVTIFSDFNLKVPSGKSMALVGQ
SGSGKSSVLSLILRFYDPTAGIIMIDGQDIKKLKLKSMRRHIGLVQQEPALFATSIYENI
LYGKEGASESEVMEAANLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKN
PEILLLDEATSALDVESERVVQQALDQLMRNRTTVVVAHRLSTIKNSDMISVIQEGRIIE
QGSHSSLVKDKNGPYSKLISLQHQQQNNP
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtttggggatccagcaacagaagccctggcagcagcgaccaagaaggagaag
gagcggccaagtgtgtcatttcttaagctcttctcctttgctgatctctacgattgtgtt
ctgatggctcttggatccattgctgcgtgcattcacggagcctccgttccagttttcttc
atcttcttcgggaaactcatcaacatcatcggtcttgcttacctcttcccgcaagaagct
tctcataaagtcgccaagtactctttggattttgtatatctaagtgtggtgatactcttc
tcatcatggatagaggttgcatgctggatgcatacgggagagagacaagcggcgaagatg
agaaaagcttatttgcggtcaatgttaagtcaagacataagcttattcgacaccgaatct
tccaccggagaagtcatctctgccatcacctccgacatccttgtcgtccaagatgctatc
tcggagaaggtagggaattttttacactacataagccggttcatagccggttttgcgatc
ggatttacaagtgtatggcaaataagtctcgtcactctctccatagtcccactcatcgct
ctcgctggcggtatctacgcttttgtcggcaccggacttaccgtgcgtgtccgaaaatca
tacgtcaaggccaacgagatcgcagaagaggtgatcgggaatgtgaggaccgtacaagcc
ttcacgggagaagaaaaggcagtgaattcataccaaggagctttgaagaacacttacaat
tacggaagaaaagctggtttagccaaaggactaggacttggttcgatgcactgtgttctg
tttttatcttgggctttgcttatctggtacacaagcatcgttgttcacaagggaatcgct
aatggcggcgaatctttcacgaccatgctcaacgttgtcatcgctggcttgtctcttggt
caggcggctccagatatttccacattcataaaagcgagagctgctgcatatccgattatt
cagatgattgaacggaacacgaatgtgaaaacaggtcgcgaactcgggaaagtagttgga
gacatccaatttagggacgtgactttcacctacccgtctcgccctgacgtggtgatcttt
gacaagctaaaccttgttatccctgcgggtaaagttgtggctcttgtcggaggaagtggg
tctgggaaaagcaccatcatatctttaattgaaaggttctacgagcctaccgaaggggtg
gtgatgctggacggcaacgatatcagatacttggatctcaagtggctaagaggacacatt
ggtctggttaaccaagagccttccctgtttgcaaccaccattcgtgagaacattatgtat
ggtaaagacgatgccaccgctgatgaaattacccatgctgcaagtctcactgaagctgtt
tcattcatcaacaacctcccggatggattcgaaacccaggtaggtgagagagggattcag
ctatctggcggacagaagcagaggatcgcgatttcgagagcgataatgaagaatccgtcg
atactcttacttgatgaggcaacaagcgcactagacgcagagtcagagaaaagcgtgcaa
gaagctttggacagagtgatggttgggaggacgacgatcgtggtggctcatagactctct
accgtaagaaatgctgacatcatagcggtcgttggaggagggaagatcatcgagtccgga
agccacgacgaactcatctccaaccctgatggagcttactcttctctccttcgtatccaa
gaagctgccagacctaacttgaaccacactccaagcttaccaatcagtacaaaaccctcg
ccggaactaccaataacaaagacggaccttttcaccgttcatcaacatgtaaaacaaccg
gacacaagtaaacatgccaaagtaacgttgggacgtttatactctatgatacgtccagac
tggaagtacggattctgtggtacgttaggttcctttgtctcgggagctcaaatgccgctt
ttcgcgcttgggatctcagacgctttagtatcttattacatggactgggatacaactcga
aacgaggtcaagagaatctctatcctcttctgttgtgcctccgtcatcactgtcatctcc
cacattattgagcacaccagctttggtattgtgggtgagcgtctcactcttcgagtccga
caaaagatgtttacagcgatcttgaggaatgaaatcgggtggtttgataaggtcgataac
actagctctatgttggcctcgcggcttgaaagtgatgcgactttacttaaaaccatagtg
gtcgatagatccacgattctactggagaatttagctcttgttgtgacatctttcatcatt
tcctttatactaaactggcgtctcactcttgttgtcttggccacataccctttgattata
agcggtcatatcagcgagaaacttttcatgcaaggctatggagggaacttgagtaaagcg
tatttaaaggctaacatgttggccggagagtctattagcaacatccgaactgtggccgcc
ttttgtgctgaggagaaggttttggacctttattctaaagagcttctagaaccttccaaa
cgttctttcaggcgtgggcaggtggccgggattttgtacggtgtttctcagttctttatc
ttctcctcctacggccttgctctctggtacggttcgatttcgatggagaaaggattatca
agtttcgaatctgtgataaaaacattcatggttttgatcgtaacggcgttagtgatgggt
gaagtgttggctctagccccggatctgcttaaaggaaaccagatggttgcttcagttttc
gagttactggaccgaagaactaaagttgttggagatactggcgaggagctaagtaacgtg
gaaggcacaattgagttggaaggtgtttacttcagttatccttcacgccccgatgtgact
attttcagtgattttaacctaaaagttccttccggcaaaagcatggcgcttgtggggcaa
agcgggtcagggaaaagctcggtcctttcgctcattctccggttctacgatcctacagcc
ggaataatcatgatagatggacaagacataaagaagctgaaacttaaatcaatgcgaaga
cacattggtctggttcaacaagaacctgctctttttgcaacgtcgatttatgagaacatc
ttgtacggtaaagaaggagcttctgaatctgaagtcatggaagcagctaaccttgcaaac
gctcacagcttcatcagttctctcccggaaggttactcaacaaaagttggtgaacgaggc
attcagatgtcaggtggccagcgacagaggattgctatagctagagccgtcctcaagaat
ccagagattttgctccttgacgaagccacaagcgccttggacgttgaatcagagcgtgtg
gtccaacaagcattggatcagctcatgaggaaccggaccaccgtggtggtagctcaccga
ctatcaacaatcaagaactcagatatgattagtgtaatacaagaaggtagaatcatagag
caaggcagccacagtagcctcgttaaggacaagaatggtccttactctaaacttatcagt
cttcagcatcagcagcaaaataatccttag
DBGET
integrated database retrieval system
