Corynebacterium resistens: CRES_1427
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Entry
CRES_1427 CDS
T01538
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
crd
Corynebacterium resistens
Pathway
crd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRES_1427 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crd03021
]
CRES_1427 (rho)
03019 Messenger RNA biogenesis [BR:
crd03019
]
CRES_1427 (rho)
Transcription machinery [BR:
crd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CRES_1427 (rho)
Messenger RNA biogenesis [BR:
crd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRES_1427 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEI09782
UniProt:
F8DZ96
LinkDB
All DBs
Position
complement(1723128..1725164)
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AA seq
678 aa
AA seq
DB search
MRTFEVNTRSHLRRLQCERTYVSLSDILSRAEANGLATLKLTELRQIATAQGLKGTSALR
KGDLIAAIETAGGRGPSASRGATSTPRTESAATGSVDSSDSDAEGNSATRRPRRRVVRKD
VSLSADENGATGDNARAGDQGAASNNTSGEGDGSDSPAGGDADRKGRDRDNNGRTNGRDD
RGNNDGSDNRDDRDRRDGEDDDDQRGNRHRRGGRENRRNRRNRRNRRHRDGGNDRGGDRE
DGNGNNRNDGNDEGRGGRNRNNRDGRDGRGKGGDRDGGDNGNANNGNNEPEKLTPVAGIL
DFVDANTAFLRTTGYHAGPTDVYVPMNTARKHGMRHGDAITGFIRNKNQNNNHHGRGRNR
QKYTPIHQVETVNGLSPEEAAARPHFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGK
GQRALIVSPPKAGKTTILQDIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIAS
TFDRPPGEHTNVAELAVERAKRLVEQGKDVVLLLDSITRLGRAYNNSSPASGRILSGGVD
SNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIA
ERRVFPAVDVNPSGTRKDELLLGPEEARIMHKLRRILSALDSQAAIDLLIKQLRKSKTNR
DFMLQVASSAPLAEEDDE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacttttgaagtgaacacccgttcccatctgcgcaggctgcaatgtgaaaggacc
tacgtgagcctgtccgacattctttcccgggccgaggccaatggtttggcgaccctaaag
ctgaccgaattgcgccagattgccactgcccaggggctcaaaggcacctccgctttgcgt
aagggtgacctcatcgctgctattgaaaccgcaggtggcagggggccgtctgcatctcgg
ggtgctacttccacgccgcggacggaatctgctgccactggctctgttgattcctctgat
tccgacgccgaggggaattctgcaacgcgccgaccacggcgccgcgtagtgcgcaaagat
gtttccctttccgccgacgaaaatggtgccacaggtgataacgcgcgcgccggcgatcaa
ggagctgcgagcaacaacacctctggtgaaggtgacggttctgacagccccgccggcggc
gatgcggatcgcaaggggcgtgaccgcgacaacaacggcaggaccaacggccgcgacgac
cgtggaaacaacgatggctccgacaaccgcgatgatcgggatcgccgggatggtgaagac
gatgacgaccagcgcggtaatcgtcaccgccggggcggacgcgaaaatcgtcgcaatcgc
cgcaatcgtcggaaccgccggcatcgcgatggcggtaatgatcgcgggggagatcgtgag
gatggaaacggcaacaaccgcaacgacggcaacgatgagggtcgtggtggtcgcaaccgc
aataaccgagatggtcgcgacggtcgcggtaagggcggcgaccgtgatggtggggacaat
ggaaatgccaacaacggtaataacgagccagaaaagctaacgcccgtggcgggcattctc
gacttcgtggatgccaataccgcattcctgcgcaccactggctaccatgcgggtccgact
gatgtttatgtgccgatgaacacggcacgcaagcacggtatgcgccacggagatgccatc
accgggtttatccgtaacaagaaccagaacaacaatcaccatggtcgcggacgcaatcgg
cagaagtacacccctatccaccaggtggaaacggttaatggactcagccctgaagaggca
gcagcgcggccacatttttccaagctaaccccgctgtaccctaaccagcggctgcgtttg
gaaaccgagccaaaaattctcaccacccgcgtgattgacctgattatgcccattggtaag
gggcagcgcgcgcttatcgtctcaccaccaaaggctggtaagacgacgatcctgcaggac
atcgccaacgcgattgctaccaataaccctgagtgttacctcatggtcgtgctggtcgat
gagcgcccggaagaagtcaccgacatgcaacgcagtgtcaagggagaggtcattgcctcc
acctttgaccgtccgccgggtgagcacaccaacgttgccgagctggctgtggaacgtgcc
aagcggcttgttgaacagggcaaggatgtggtgttgctgctggattccatcacccgcttg
ggacgtgcgtacaacaactcttcgcccgcctctggccgtatcctctcaggtggtgtggat
tccaatgcgttgtatccgccaaagcgcttcttgggtgctgcccgcaacatcgaaaatggt
ggttccttgacgatcatcgcgacggccatggtcgagaccggctccgccggcgataccgtg
atcttcgaggaattcaagggcacaggcaacgctgaacttaaactggatcgcaagattgca
gaacgccgggtgttcccggcagtggatgtcaacccatccggtacccggaaagacgagctg
ctgctggggccggaagaagcgcgcatcatgcataagctgcggcgaattctgtccgccttg
gattcccaggcagcaatcgacttgctcatcaagcagctgcgtaagtcgaagacgaaccgc
gatttcatgctgcaagtggcaagttccgcgcctttggctgaggaagacgacgagtag
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