Crassostrea gigas (Pacific oyster): 105317482
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Entry
105317482 CDS
T03920
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105317482
Membrane trafficking [BR:
crg04131
]
Protein recycling
Others
EARP complex
105317482
Endosome - Golgi transport
Tethering complex
GARP complex
105317482
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
NBD94
COG4_N
GrpE
COG5_N
COG3_N
NPF
P22_AR_C
CREPT
DUF2009
Motif
Other DBs
NCBI-GeneID:
105317482
NCBI-ProteinID:
XP_011412431
UniProt:
K1Q8K0
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All DBs
Position
LG6:25415430..25429398
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AA seq
841 aa
AA seq
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MATVDDDDVLDDDQLDVLLNFPPDIQEVIEQILPSDDPLDRADFNPIDYINTLFPTEQSL
VNIDDVVGKMRMKIRKLDDEIRSVVRGQTNAGEDGRLALEEAQRAIQELFSKIKEIKDKA
DKSEEMVKEITRDIKQLDHAKKNLTSSITTLNHLHMLVGGVDSLSNLSKRRQYGEVANLL
QGVQNVLEHFQKYMEIPQIKELADRVKSIQSDLGSQILADFEEAFQGAGAKYGPSNQRQL
KEACLVVDVLDSKVKKDLLAWFVKLQLSEYLVLFGEKEEVAWLDKIDRRYAWIKRTLVDF
EEKFGPLFPEAWEVSERICIEFCNLTRSELSRIMGRRTHEIDVKLLLFAIQRTTNFEALI
AKRFTGVTLNEAQSGKVANPQTQSSNPFVESTNPFETESEEEMSSSEESKEPLKQAGSPF
TGIISKCFEQHLNIYIDSQDKNLAELINRFLEDLRQQGTPRMETEESSNVLPSCADLFVF
YKKCMVQCSQLSTGKPMIDLTRTFQKYLREYANRVLLNNLPKASNQSGGISSASGLIQSI
LKEGEVTKFTEEEQCRICSILCTAEYCMETSQQLEEKLKEKVNPSLSNQIDMNSEQDTFH
NVISNCIQLLVQDLETACEPALTAMSKMSWSSVESVGDQSGYISALTGHLKQNLPVIRDN
LASSRKFFTQFCLKFANSFIPKFISHLFKCKNISTVAAEQLLLDTHSLKTILLDLPSLGS
QVVRKAPTSYTKIVVKGMTRAEHILKVVMSPHTDQHRFVESYYRMLSDSDLNEFQKVLEM
KGLRRSEQSNILEIYRAKMPVSAAAGSTHSDTNQNSALQTQNSEQESSRIRKLERLIKKR
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctactgttgacgatgatgatgtgttagatgatgatcaattagacgttttactcaat
ttcccacctgatatacaggaagtcattgaacagattcttcctagtgatgatcccttggat
agagcagattttaatcccatagactatatcaacacattatttcctacagagcagtcactt
gtgaacattgacgatgtggttggtaaaatgagaatgaaaataagaaaactagatgatgag
atacggtctgtggttcgaggccaaaccaatgccggagaggatggcaggctagccctggaa
gaagcacagcgagcaatacaggaactgttctccaagatcaaggagatcaaagacaaggca
gacaaatcagaggaaatggtgaaagaaataactcgagatataaaacaactagatcatgcc
aaaaagaatctgactagctccattacaacacttaatcatctacatatgctagtgggaggt
gtggattctctatcgaatttatccaaaagacgacaatatggagaagttgcaaatttactc
caaggagttcagaacgtcttagaacactttcagaaatacatggaaatacctcaaattaaa
gaactagctgacagagttaagtccattcagtctgatctgggatcacaaattctggctgat
tttgaggaagcttttcaaggagctggagcaaagtatggtccctccaatcaaagacaactg
aaggaagcttgcttagttgttgatgttttggattccaaagtaaaaaaagatcttcttgca
tggttcgtcaaacttcagctatctgaatatttggtcctatttggtgaaaaagaagaagtt
gcttggttggacaaaatagacagacggtatgcatggataaaaagaacattagtagatttt
gaagagaaatttggtccattgtttccagaggcttgggaagtttcagaaagaatttgtatt
gagttctgcaacttaacgaggtcagagctatccagaattatgggaagaagaacacatgag
attgatgtcaaactgttgctttttgctatccagagaacaacaaactttgaagctttgata
gcaaaaagatttactggagtgacattgaatgaagcacagagtgggaaagtagctaatccc
caaacacagtcttcaaacccatttgtagagtctacaaatcctttcgagacagaatcggaa
gaagaaatgagttcatctgaagaatcaaaggagcctttgaagcaggctggttctccattc
acaggcatcatatcaaaatgctttgaacaacaccttaatatttatattgattcccaagac
aagaatctagcagaattaataaaccggtttctggaagatctaaggcagcagggaacccct
agaatggagacagaggagagcagcaatgtgctgccaagctgtgctgatctgtttgtgttc
tacaaaaagtgcatggtccagtgttcccagctcagcacaggcaagccgatgattgatctc
actagaactttccaaaaatacctcagagaatacgccaatagagtcctcctcaacaatttg
ccaaaggcctcaaaccagagtggagggatcagctcagcgtccggtttaattcaaagcatc
ctgaaagaaggggaggtcaccaagtttacagaggaggaacagtgtcggatctgtagcata
ctgtgtacagctgaatactgcatggagaccagtcagcagcttgaagaaaaactgaaagag
aaagtcaaccctagtctctctaatcagattgatatgaactcagagcaagacacattccac
aatgttatatccaattgcatacagcttttggtgcaggatttagaaactgcttgtgagcca
gcactcacagcaatgagcaagatgtcttggtcatcggttgagtctgtgggagatcagagt
ggttatatatcagccctcacaggccacctcaagcagaatctaccagtcattagggacaac
ctagcttcatctcgcaaattctttacacaattttgtttaaagtttgccaattcctttatc
ccaaagtttatcagtcatctctttaaatgtaaaaacattagcacagtggctgcagagcag
ctactcctagacacccattccctgaagacaattctgctagatctaccgtcacttggatca
caagttgttaggaaagctccaacaagttacacaaaaatagttgtgaaaggcatgactaga
gcagagcatatccttaaggttgtgatgtcaccacacactgaccagcatcgatttgtagag
agttactacagaatgctcagtgattcagatctgaatgaattccagaaagttttagaaatg
aagggtttgcggagaagtgagcaaagtaacattctagaaatttatcgagcaaaaatgccc
gtgtctgcagcagcaggatctacacatagtgacacgaaccagaacagtgccctacaaact
caaaactcagaacaggaatctagtagaatccgaaaactggagaggttgatcaagaagaga
ctttaa
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