Crassostrea gigas (Pacific oyster): 105320999
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Entry
105320999 CDS
T03920
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105320999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105320999
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105320999
03019 Messenger RNA biogenesis [BR:
crg03019
]
105320999
03041 Spliceosome [BR:
crg03041
]
105320999
Enzymes [BR:
crg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105320999
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
105320999
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105320999
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105320999
Spliceosome [BR:
crg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105320999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
TilS
Motif
Other DBs
NCBI-GeneID:
105320999
NCBI-ProteinID:
XP_011417459
UniProt:
A0A8W8M8J2
LinkDB
All DBs
Position
LG10:50104523..50114478
Genome browser
AA seq
308 aa
AA seq
DB search
MTKDLDVDSIIEQLLTAKDSSSKQVQLPETQIRQLCQLSREIFLEQPMLIEITAPVTICG
DIHGQYEDLMRHFDNCGFPPESNYLFLGDYVDRGKRSLETICLMLAYKIKFPNNFFLLRG
NHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAALVEDTIFCMHGGLSPDLTDL
KQISELERPLDVPDHGLICDLLWSDPDEDITGWGENDRGVSFTFGGDIVKEFLKKHNFSL
VVRAHQVVEDGYQFFQKRRLLTLFSAPNYCGEFDNAGAVMRVTDDLTCSFKILEPKIEKS
VAVTKGKK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaccttgatgtagactccataatagagcaactgcttactgccaaagattca
tcttcaaagcaggttcaattacccgaaacacaaataaggcaattatgtcagctctcccga
gaaatatttttggagcaacctatgttaatcgagatcacagcccctgtgactatatgtggc
gatattcatggacagtatgaagacttaatgagacattttgataactgtggatttcctcca
gagtcaaactacctgtttttgggtgactacgtagatcgaggaaaaaggtccctagaaacc
atatgtctgatgctggcttacaaaatcaagtttccaaacaatttctttttgttaagagga
aatcacgagtgtgcctccattaacagaatttatggattttacgatgaatgcaagagaaga
tacaacataaagctctggaaaacattcactgattgcttcaactgtctaccagtggctgca
cttgttgaagataccatattttgtatgcatggtggattatcacctgatttaacagactta
aaacagatatctgagcttgaaaggccattggatgtaccagaccatggtctcatttgtgat
ttactttggtcagacccagatgaggacatcactggttggggagaaaatgacagaggtgtg
tcttttacctttggtggagatatcgttaaggagtttttgaagaagcacaatttcagtctt
gttgttagagctcaccaggttgtagaagatgggtatcaattctttcagaaaagaagactg
ctgactttgttcagtgctccgaattattgtggtgaatttgacaatgctggagctgtaatg
agagtaactgatgacctaacttgctccttcaaaatacttgagccaaagattgagaagagt
gtggcagtaacaaaaggaaagaaataa
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