Crassostrea gigas (Pacific oyster): 105331184
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Entry
105331184 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-beta isoform X3
KO
K08533
RAR-related orphan receptor beta
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331184
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331184
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331184
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331184
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105331184
NCBI-ProteinID:
XP_011431574
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Position
LG1:complement(33376653..33382124)
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AA seq
514 aa
AA seq
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MDVVNAEKAPMENKSREKVNRRNRKREKYVPSSEPLELPFCRICGKRASGIHFGVYSCEA
CKAFFRRCLQRTSPYKCDKGGNCIIDEQQKGLNCSACRLKKCQELGMSKEGIRQGRYTVA
ERTNVIMEVKKLHKNGILQQNQCQNSVTPEPNGRLSVLSDSLSPPDSSMNFSPDVYRKDE
VPSCSSSLSCSNSLTSGSPGSIIDSTNNHACILDISEEILTKQAVNQSTISKTSLRATDS
QSNQSEAHALRENLMKGYRALKPFERSLNDQELEKLFEDGYKKYVEKTKLFGNLEFLPAD
EYNEIYEKTQVDVDGRMKLLQDGRRDMVQIVKEYVQFTHGIPNFKTLSPKDQSTLLKASR
FEFFAILQYRALDSEREMMISYTGQSFHRSEICPYTPVEVFRGWFEFARRVKECDFSQEE
HALVLAISLTFRDRCSLEEPDKVEEIQTKLIESLENLLKETHGQTGGRRLAKIMDLFVRL
RALGEEYYQLYKTLCKDKLLTKVIPEMLQFLFDE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagtcaatgcagagaaagcaccaatggagaataagagtcgggagaaagttaat
agacggaaccgaaaacgggagaagtatgtgccatcctccgagcccctggagcttccgttc
tgccggatctgtggaaagagagcctccgggatacacttcggagtctacagctgtgaagcc
tgcaaggcattttttcgccgatgtctccagcgaacttctccctataagtgtgacaaaggt
gggaactgcattatagatgaacaacagaaagggttaaattgctccgcatgtcgtctcaaa
aaatgccaagagctcgggatgtccaaagaaggaattcgacaggggcggtacacagtcgca
gagcggacgaacgtgataatggaggtgaaaaaattacacaaaaacggcattttacaacag
aatcagtgtcaaaacagtgtgacgccggaaccaaacggcagactttcggttctttcagat
tccctctcacctccagattcttcaatgaatttttcgcccgatgtttaccggaaggatgaa
gtcccatcctgttcgtcatccttgtcgtgttctaactcattaacttccggttcccccgga
agtatcattgattcaactaataaccatgcttgtattcttgatatatcagaagagatcctc
accaaacaggctgtgaatcaaagtacaatctcaaagacatcgctacgtgctaccgactcc
caatcaaatcagtcggaagcgcatgcgcttagagagaacttgatgaagggttacagggcg
ctgaaaccttttgaaaggtctctgaatgaccaggaattggaaaaactgtttgaggacggt
tataaaaaatacgtagaaaagactaaactttttggaaacctggagtttctgccggcggat
gaatacaacgaaatctacgagaaaacacaggtggacgttgacggacggatgaaactactg
caggacggacggcgtgatatggtccagattgtaaaggagtatgtgcaatttacacacgga
attccaaacttcaaaaccttaagtccaaaggaccagtccacgcttttaaaagcctcccgg
ttcgagtttttcgccatccttcagtaccgggccctggactctgagcgagaaatgatgata
agttacacgggccagagtttccacaggtccgagatctgtccttacacacctgtcgaggtg
ttcaggggatggttcgagtttgccaggagggtcaaggagtgcgatttttctcaagaggag
catgctttggtgctcgccatctctcttacattccgagataggtgttccctggaagaaccc
gacaaagtggaggaaattcagacgaagttgattgagtcgctggaaaatctcttgaaggaa
acccacggacaaactggcggaagacgactggccaaaattatggatctatttgtccgtttg
agggcgctgggagaggaatattaccaactttacaaaaccttgtgcaaagacaaactgcta
acgaaagtcattccggaaatgctacaatttttgtttgacgaatag
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