Magallana gigas (Pacific oyster): 105343884
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Entry
105343884 CDS
T03920
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105343884
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105343884
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105343884
Membrane trafficking [BR:
crg04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
105343884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
STAT_alpha
Mis12
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
105343884
NCBI-ProteinID:
XP_011449692
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All DBs
Position
LG3:complement(55220224..55232729)
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AA seq
961 aa
AA seq
DB search
MAHEPAYTGSHHQGLVSPWKNCKLCSLQCKSSREFARHLREFHCSKEGGSYVCRYGPNNI
CPSLPLEGVSDMDYENHIARDHVQASSRKRSETQDSYSMMMSPPGSVPSVVHDQHRWTVF
DSQVNLPAALNDPLRVKRETDFFTKTWGQEFYEKMYVPESRYLPDIDRKYFEKYKHRISK
RYRRYAKYKNQIEQEAPGGETFLQQMEKNRAELQQLPKLFMLSNFDLENTDTFNAVFPWT
QVEDCQKNGGSSQSSKLLQEKLSYYLDIVEVHIAKQISTKSDAFFQAVSSHDVLQENMLK
TCQSIKQLRDKIQCIDELLTLGSLKIMKLSQTRANYVNLHNKLKLMATVHQTQPTIQLLL
STQEFVGALDLISTTQEVLTQELAGVHSFRHLGSQLAELENIIERMLQEDFGKCVSSDLN
RPIADTEPLMEEEKIVSLVFGMLRKSRFNFVDVYREEAFTAVKAIVKQTVVEAVSVAENV
DTEDGSVSSLADQMRMLNYPQWMDLLKQIFSNLLVHLKRAKTFHGVISDVIGIAAGKTLV
PSPLPSPTQEDCLLSEATHLHVSVSEEAADVMISEAEYVTVQAKLNEMLCAVCDHAHDRC
VKVITARSKDGFLERLSSSEFVALSREVEKFVTDCETISGRRCMSLRFSLQSQASKFVNR
FHEERRTKLSLILDNERWRQADVPAEFQELVNHITRTGMLTIPDRTADSEKGPAEVLVVE
TQTFAVVGTVLMLMKMMVEYCQCVDNIPSAAPDLMSRLVDLFKIFNSRTCQLVLGAGALQ
LVGLKTISTKNLALASRCLQLVVYFIPKVRQHFEEKLVSKNKSMLRNLDQVQKDYTDHIN
EITNKLVSVMEAVIAQQLSKWEVKAPMPSMCFRSICKQISKMHEAVLDILPADQVKELFG
RINSCFKKLVAQQLNTLEVSKNGGPQHGLVMSDLAFYSGTFKTLRGLESLAQDTNDVWDI
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgagccggcctacacagggtcacatcaccaagggttggtatccccttggaag
aactgcaaactgtgttctcttcagtgtaaatcttctcgggaattcgctcgacacttacgg
gaatttcattgttcaaaagaaggagggtcgtatgtgtgcaggtatggaccaaacaacatt
tgcccatcattaccactagagggagtaagtgatatggactatgaaaaccacatagcaagg
gaccatgtccaggcctctagcagaaagagatcagagacacaagatagttattctatgatg
atgtctcctccgggctctgttccttctgttgtccatgaccagcacaggtggactgttttt
gactcacaagtgaacctccctgctgctcttaatgaccctcttagagtcaagagagagaca
gacttcttcactaaaacctggggccaagagttctatgagaagatgtatgttccagaatca
cgctatctcccagatattgatagaaaatattttgaaaaatataagcacagaatttcaaag
agatacagacgatatgcaaaatataaaaatcaaatcgagcaagaagcccctggtggagaa
acatttttacaacaaatggaaaagaacagagctgaacttcagcagcttcctaagttgttc
atgctgtcaaactttgaccttgagaacacagacacattcaatgcagtatttccatggaca
caagtggaagattgtcagaaaaatggaggatcctcccaatcctctaagcttttacaggag
aagctgagttactacttggacatcgtggaggtccacatagcaaagcagatctccaccaag
tcagacgccttcttccaagcggtgtcatctcatgacgtgctacaggaaaatatgctgaaa
acctgtcagtccatcaagcagctgagggacaagatccagtgtattgatgagctgctgacc
ctagggtcactgaagataatgaagctatctcagaccagggcaaactatgtcaatcttcat
aataagctgaagttaatggccactgttcaccagacacagcctactatacagttactgctg
tccactcaagagtttgtgggggccctagatctcatctccaccacccaggaagtcctgacc
caggagttggcaggggtacatagcttcagacatcttggttcccagttagctgagttagag
aacatcatagagaggatgttacaggaggattttggaaaatgtgtgtcttctgacctaaat
cgaccaatcgctgatactgagccactgatggaagaggagaagattgtatcccttgtgttt
ggaatgctgaggaagagtcgttttaactttgtagatgtttacagagaggaggctttcaca
gcggtcaaggccattgttaaacagacggtagtagaggctgtgtcggttgctgagaatgtg
gatacagaggatggtagtgtcagcagcctggccgatcagatgagaatgttgaattatcct
cagtggatggatctcctcaaacaaatcttctctaacttattggtgcatctcaaaagagca
aagacattccatggagtgatcagtgatgtgatagggatagccgcagggaagaccctggtc
cccagccccctaccctcccccacacaggaggattgtctcctgagtgaagccactcatcta
catgtctctgtgagtgaggaggcggcagatgtgatgatttcggaagctgagtatgtcacg
gtccaggcaaaacttaatgagatgttgtgtgctgtatgtgaccacgcccatgataggtgt
gtcaaggtcattacagccaggtcaaaggatggatttctggagcgtttgtcttccagtgaa
tttgtggctctgtccagggaagtggagaagtttgtgacggattgtgagaccatcagcggg
cgtcggtgtatgtccctcagatttagtctgcagtcacaggcatccaaatttgtgaacaga
tttcatgaggagagacggacaaaactcagcctgatcctggataatgagcgatggagacag
gccgatgtccctgcagagttccaggaacttgtcaatcacatcacacgcacaggcatgctt
accataccagacaggacagcagactcagagaaaggtcctgctgaagtgctggtggtggag
acccagacatttgctgttgtgggcactgtgctgatgttaatgaagatgatggtggagtat
tgtcagtgtgtggacaacattccctcggccgcccctgacctgatgtctagactggtcgac
cttttcaagattttcaactcaagaacttgtcagttggttcttggtgcaggtgctctgcaa
cttgtggggctaaaaaccatttctacaaaaaatttagccctggcatcgaggtgcttgcag
ttggttgtttacttcattccaaaagtccgccagcattttgaggaaaaacttgtgtctaaa
aataaatcaatgctcagaaacctggaccaggtacaaaaggactacacggaccatatcaat
gaaattacaaacaaacttgtgagtgtcatggaagctgtcatagcccaacagctgtcaaag
tgggaagtgaaggccccaatgccatcaatgtgttttagatccatttgtaaacaaatcagc
aagatgcatgaggctgtccttgacatacttccagcagatcaggtcaaggaactgtttggg
aggataaacagttgttttaagaagttggtcgctcagcagctgaacacactggaggtctcc
aagaatggcggccctcagcatgggctggtgatgtccgaccttgcattctactcgggaaca
ttcaagacattacgaggattagagagcctggctcaggatacaaatgatgtgtgggatatc
aggtga
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