Carnobacterium sp. 17-4: CAR_c10300
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Entry
CAR_c10300 CDS
T01452
Symbol
hbs
Name
(GenBank) non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component
KO
K03530
DNA-binding protein HU-beta
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crn03032
]
CAR_c10300 (hbs)
03036 Chromosome and associated proteins [BR:
crn03036
]
CAR_c10300 (hbs)
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c10300 (hbs)
DNA replication proteins [BR:
crn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CAR_c10300 (hbs)
Chromosome and associated proteins [BR:
crn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CAR_c10300 (hbs)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CAR_c10300 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEB29723
UniProt:
F4BQB8
LinkDB
All DBs
Position
1063856..1064131
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AA seq
91 aa
AA seq
DB search
MANKAELIENVATSTGLTKKDATSAVDAVFESIQTSLSEGEKVQIIGFGNFEVRDRAARK
GRNPQTGEEIQIAASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaagcagaattaatcgaaaacgttgcgacttcaacaggacttactaaaaaa
gatgcaacttcagcagtagatgctgtttttgaatcaattcaaacttcattaagtgaaggt
gaaaaagttcaaattattggttttggtaactttgaagttcgcgatcgtgctgcacgtaaa
ggtcgtaaccctcaaacaggggaagaaatccaaattgctgcaagcaaagtacctgcattt
aaaccaggtaaagctcttaaagacgcagttaaataa
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