Carnobacterium sp. 17-4: CAR_c11760
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Entry
CAR_c11760 CDS
T01452
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c11760 (addA)
Enzymes [BR:
crn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAR_c11760 (addA)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CAR_c11760 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_30
MHB
KdpD
Motif
Other DBs
NCBI-ProteinID:
AEB29868
UniProt:
F4BR72
LinkDB
All DBs
Position
1220315..1224121
Genome browser
AA seq
1268 aa
AA seq
DB search
MMNPLPLKPENSHFTDGQWQAIYEEGHNILVSASAGSGKTTVLVQRVIEKIKSGTNVDEM
LIVTYTEAAAKEMKARIQVAIQEAVTSESDMELKRHLTRQVTLIHQASISTLHAFCLQVI
RRYYYLINLDPIFRLLTDETEILLLKESVWEEVREELYGEEDTLFKDLTASYSNDRSDAG
LTDLIFSLYEFSRANPRPAVWLEQLSYLYQVEENDLTTGVLFKELLKPQILSVLDSLVEL
SQVAAQLGEGTEELKNQTDLVRSEWIALQEIQAHINEHNYQAAYNCCKNFEFARWKAIKK
GTDEAIKETAEEMKGLRDQYKARFKELANDYFSASPQEQIDLMLSAAPLVEEMARVTQLF
TEAFRQRKDERNLLDFNDLEHLTLQILAQFNEENWIPTEASKHYRDKFKEVMVDEYQDIN
QLQENILRWLAHDQSDQGNLFMVGDVKQSIYSFRLADPGLFLKKYEQYEHHQLGERIILA
ENFRSRGEVLQFTNLVFEQLMDKAVGQMDYDEAAKLVQGFTGFPELQKHQPELLIYEKGT
NDTEDEEEETESVNWDMRIEDKTEGELLMVGQKIQELIQTQFPIYDKRAKTTRPINYRDI
VLLTPTKKNNLVLMEMFKRLAIPLQVNDTQNYFQTTEITIMMSLLKVIDNPYQDIPLAAV
LRSPLVGLDENELASIRISQKTGDYFDALKTFYQSYPGVEKASRFTSNLYGKIDMFLTRL
NKWREIARRDHLVALIWTIYDDTGFLDYVGGMSSGKQRKANLHALYERASSYEKTSFKGL
FQFVRFIEKMQEKDKDLAEPTAISEDENAVRVMTIHASKGLEFPVVFVLDLTKKFNLQDI
KKSYIFNEQYGVGTDFKDLDRRIRYPSLPEIALKVEKKTKLLSEEMRKLYVALTRAEEKL
FLVGSYKDEAAAWKEWGVVSSHNPTVLPADIRFTASSLMKWIGLSLVRHPSSQNEEISVS
ARNGAITNQSAHFSIHFYDESAIQEQLISKDNGTDENWLEKLDQLQDKISETEQPKKRTV
QKALELMNYIYEHEGASHTTSYQSVSEIKRLFEEPESDQMVKIDINQPRNRNRYVEETLD
RPLFMAELTAPSNAEIGTATHSVMQAIDLSTAPTKETLETLIASLIKNGVLKEDVASKVN
VEQVEEFFTTVLGKMIIDFSKDVHREEPFSLLLEAEKLFTDMNGDAEDKILIHGIIDGYI
ELEDHIVLFDYKTDRVSHYGSQSGEKMLEKYKGQMNLYRSALESILDKKVTETYLCLLDT
GEIISVPS
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacccacttccgctaaaacccgaaaacagtcattttaccgatggacaatggcag
gcaatctatgaagaaggccataatatacttgtgtctgcttcggcgggttcaggtaaaaca
acggttcttgttcaacgtgtgattgaaaaaataaaatccggcaccaatgttgatgagatg
ctgatcgtgacttatacagaagcagccgcgaaagaaatgaaggctcggatccaagttgcg
atccaagaagcagtcacatctgaaagcgatatggagttaaaaagacaccttactcgacaa
gtaaccttaatccaccaagcgtcaatcagtacattgcatgctttttgtcttcaagttatc
cgtcgttattattatttgattaatttagatcctatatttagactattgacggatgaaaca
gagatccttttacttaaagaaagtgtctgggaagaagtaagagaagagttatacggagaa
gaagacaccctttttaaagatttgacagcttcgtactccaacgatcgtagcgatgcgggt
ctaacggacttgattttctcattgtatgaattttcaagagctaaccctagacctgctgtg
tggctagaacaattatcctatttataccaagtagaagaaaatgatttaacgactggtgtt
ttatttaaagaactgttaaaacctcaaattttatcggtgttagacagtctagtcgagctt
tctcaagttgctgctcaactaggtgaaggtactgaagagctaaaaaaccaaaccgatttg
gttcgcagtgaatggattgcgttgcaagaaattcaagcgcatatcaacgaacacaattat
caagcagcgtataattgctgtaaaaactttgaatttgctcgttggaaagcaatcaaaaag
ggaaccgatgaagcaataaaagaaacagctgaggaaatgaaggggttacgtgatcagtat
aaagctcgttttaaagaattagctaatgattatttctctgcctctcctcaagaacaaatc
gacttaatgctaagtgctgctcccttggttgaagaaatggcacgtgtgacacaactcttc
acggaggcttttcgtcagcgcaaggatgaacggaacctattagattttaatgatttagaa
catttgactcttcaaattctggctcagttcaatgaggaaaactggattccaactgaagct
tcgaagcattatcgagacaaatttaaagaagtcatggttgatgaataccaagatatcaat
caacttcaagaaaatatattgcgttggttggcccatgatcaatcagatcaaggaaacttg
ttcatggtaggggatgtgaaacaatctatttattcgtttcgtttagctgatccaggatta
tttttaaaaaaatatgaacagtacgagcaccaccaattaggtgaaaggattatactggct
gaaaacttccgttcacgaggtgaagtactgcaattcactaatttagtctttgaacaacta
atggataaagcagttggacaaatggattatgatgaagcagctaaactcgtacagggtttt
acgggttttccagaattgcaaaaacaccaaccggaacttttgatctacgaaaaaggcacc
aatgacaccgaagatgaggaagaagaaacagaatcggttaattgggatatgcggattgaa
gataaaacggaaggcgaattattgatggtcggccaaaaaatccaagagttgatccaaact
caatttccaatttatgataaacgggctaaaacaacgcggccaattaattatcgagatatt
gttttgttgacaccgactaaaaagaataacttagtattaatggaaatgttcaaacgattg
gctattccacttcaagtaaacgacacgcaaaattactttcaaacaactgagatcacaatc
atgatgtctttgctgaaagtcattgataacccttatcaagatattcccttggctgcagtg
ttgcgttcgccacttgttgggttagatgagaatgaattggcttcaattaggattagccaa
aaaactggggattactttgatgccttaaaaacgttctatcaatcttacccaggtgtagaa
aaagcgagtcgttttacatcaaatttatatggaaaaatcgacatgtttttaacacggttg
aacaaatggcgtgaaattgctcgacgagaccatttagttgcactaatatggacgatttat
gatgatacaggctttttagactatgttggaggaatgagttcgggtaaacagcgcaaagct
aatttgcatgctttatatgagcgtgcatctagctatgaaaaaacaagttttaaagggctg
tttcaatttgtacgattcatcgaaaaaatgcaagaaaaagacaaagatctggcagagcct
acagctatatctgaagatgagaacgctgttcgagtgatgacgatccacgcaagtaaaggg
ttagagtttccagtcgtctttgtattagatttaacgaaaaaatttaatttgcaagatatc
aaaaaaagttacatttttaacgaacaatatggagtgggaacagattttaaagatttggac
cgtcgcattcgatacccttctttaccggaaatcgctttaaaagtggagaagaaaacgaaa
ttgttatctgaagaaatgcggaaattatatgtggcattgacacgtgcagaagaaaagttg
tttttagtgggttcgtataaagatgaagcagcagcgtggaaagaatggggtgtcgttagt
tcccacaatccaaccgtcttgccagccgatattcggtttactgctagtagtttaatgaag
tggatcgggttatcccttgttcgtcatccttcaagtcaaaacgaggagatctctgtcagt
gccagaaatggagccattaccaatcaatctgcccattttagtattcacttttatgatgaa
agtgcgattcaagaacaattgatttcaaaagacaatggaacggatgaaaactggttagag
aaattggatcagctacaagacaaaatttctgagactgaacaacccaaaaaacgcaccgtt
caaaaagcgttagaattgatgaattacatttacgagcatgaaggggcttctcatacaaca
agttatcaatcggtttcagaaatcaaacggttatttgaagagccggaaagcgatcaaatg
gttaaaatcgatatcaatcaaccgagaaatcgaaaccgttatgttgaagaaaccttagat
cgaccactgtttatggctgaattaactgctccttcaaatgcagaaataggaacggcaacg
cattccgtgatgcaagctattgatttaagcacggctcctaccaaagaaacacttgaaacc
ctgattgcttcattgataaaaaatggcgtcttaaaagaagacgttgcttcaaaagttaat
gttgaacaagtagaagagttttttacaactgtgcttgggaaaatgatcattgatttttca
aaagatgtccatcgtgaagaaccgttctcactcttattagaagctgaaaaactgtttaca
gatatgaatggcgacgctgaagataaaatattgattcacggaattattgacggctatatc
gagttagaggatcacattgttttatttgactacaaaacagatagagtcagtcattatgga
tcacaatcaggtgagaaaatgttagagaagtataaaggtcaaatgaatttataccgatct
gcattagaatctattttagataaaaaagtcactgaaacctatctatgtttactggataca
ggagaaatcatatctgttccatcataa
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integrated database retrieval system
