Crassaminicella thermophila: FQB35_01780
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Entry
FQB35_01780 CDS
T06186
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
crs
Crassaminicella thermophila
Pathway
crs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FQB35_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crs03021
]
FQB35_01780
03400 DNA repair and recombination proteins [BR:
crs03400
]
FQB35_01780
Enzymes [BR:
crs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FQB35_01780
Transcription machinery [BR:
crs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FQB35_01780
DNA repair and recombination proteins [BR:
crs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FQB35_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QEK11196
UniProt:
A0A5C0SBY0
LinkDB
All DBs
Position
375710..376657
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPKIECVELSPDNTYGKFIVEPLERGYGITLGNSLRRILLSSLPGVAVTSVKIDG
VLHEFSTVPGVKEDVTEIILNLKELSAKIHSDGPKVVRIEANGPRVVTAGDIIADADVEI
LNPDLHIATLEDDARLVMEISISKGRGYVPAENNKTPGMPIGVLPVDSIYTPVKKVSYHV
ENTRVGQVTDYDKLTLEIWTDGSIKPDEGVSLGAKIMNDHLRLFIDLTDHVENVEIMVEK
EEDKKEKVMEMTIEELELSVRSYNCLKRAGINTVEELTQKSEEDMMKVRNLGKKSLEEVQ
QKLHELGLGLKPSED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatagaaaagccaaaaatagagtgtgtggaattaagtccagataatacctat
ggaaaatttattgtagagcctctagaaagaggttatggtattacattagggaatagtctg
cgaagaatattgctttcatctctaccaggcgttgctgttacatctgtaaaaatagatggt
gtacttcatgaattttcaacggttcctggagtaaaagaagatgtgacagaaataatacta
aatcttaaagaattatctgcaaaaattcattctgatggaccaaaggttgttagaattgaa
gctaatggtccaagagtagttactgcaggagatattattgctgatgcagatgtagaaata
ttaaatcctgatctgcatattgcaacacttgaagatgatgctagactagttatggaaata
tccatttctaagggtagagggtatgttccagcagaaaacaataaaacacctggaatgcct
ataggtgtattacctgttgattctatatatacgcctgttaaaaaagttagttatcatgtt
gaaaatacaagagttgggcaagttactgattatgataaacttacgttagaaatatggacg
gatggtagtataaaaccagatgaaggtgtttctttaggtgctaagattatgaatgatcat
ttaagattatttattgatttaacagatcatgtagaaaatgtagaaattatggtagaaaaa
gaagaagataagaaagaaaaagtaatggaaatgactattgaggaacttgaactttctgtt
agatcatataactgtctgaagagagctggaatcaatactgtagaagaacttacccaaaaa
tcagaagaagatatgatgaaggtaagaaatctaggtaaaaaatcccttgaagaagtacag
caaaaactacacgaacttggtttaggcttaaaacctagtgaagactag
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