Crassaminicella thermophila: FQB35_11940
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Entry
FQB35_11940 CDS
T06186
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crs
Crassaminicella thermophila
Pathway
crs03420
Nucleotide excision repair
crs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FQB35_11940
03430 Mismatch repair
FQB35_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crs03400
]
FQB35_11940
Enzymes [BR:
crs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQB35_11940
DNA repair and recombination proteins [BR:
crs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQB35_11940
MMR (mismatch excision repair)
Other MMR factors
FQB35_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Hint_2
DUF3553
DUF1870
Motif
Other DBs
NCBI-ProteinID:
QEK12974
UniProt:
A0A5C0SHR9
LinkDB
All DBs
Position
complement(2360847..2364110)
Genome browser
AA seq
1087 aa
AA seq
DB search
MDLSMLNPPQREAVLKTEGPLLILAGAGSGKTRVLTHRIAYLIEELGVYPGNILAITFTN
KAAKEMKYRVEDLLGRPTDIWVSTFHSACVKILRRDIEKIGYTNDFVIYDTSDQKVVFKE
CYKELNINDKLYPLPMVQHRISEAKDKMLTPEKFIKEYAGDFQMETIGKIYKLYQKKLKK
NNALDFDDLIFKTVELFENDKVTLSYYQNKFQYIMVDEYQDTNQLQYKLISMLAAKHGNL
CVVGDDDQCIVEGCKVETQDGKIAIEEIKEHQKVLCASGQAKTMIGTVDKKMKKEYKGPI
VRIKTKSGKEIKGTPNHIGFARLNPQPGVYYVYLMYKKGYGYRIGQTQGVRSRKGEITNG
LAVRLNQEHADKMWILKVCFSKDEAHFYEQLYAFKYGIPTTVFHANGRKMTLLQEHIDAI
YKEINTEKAAINLMNDLCIFEEYPQHLCNAVVRGQSIRRIVNVTSFGGRETGLDAGWHGH
RICLNTSGEDLKEKASKDFPVRDGQRNTWRIETERKEYDEAYLYARELAQLDDTIDIVKK
ARLTEKKSFYYMPLAHMKPTMHVAVYEDGKIIEDIIEEVVFEEYDGYVYDLSVPHFRQYI
CEGIVVHNSIYSWRGADIRNILNFEDDFKNATVIKLEQNYRSTQNILDAANCVIKNNRSR
KNKKLWTSQESGEILRYYRAMNEHDEAGFVVKQIKDMVETDGRNYSEFAILYRTNAQSRV
VEEMLMKAGIPYRIYGGLKFYDRKEIKDIIAYLRLIQNPVDDVSFKRVINVPKRGIGDRT
VEKLEQMANQTGESIFSVILDDELIQGFSKRVKAGIKDFALLITKYGIMKEEIGITELIK
NVLQESGYMDELRNENTVEAEARIENLQEFLSVAMDFERSSEVNTLEEFLSNISLVSDLD
TMDDEENAVVLMTLHSAKGLEFPVVFLIGMEERIFPISRALESDRDLEEERRLCYVGITR
AEEMLFLTHARMRTLYGRTNYNPMSRFIDEIEERLIDMDKEEMKKRDQKALAPNIGIYRG
ATLKETPKPINTGSKDVRPGSKVKHDKFGIGTIISVKKSTSGTELTIAFDNAGIKKLIKE
FAPISVI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtccatgttaaatcctccacagagggaggctgttttaaaaacggaaggacca
ctacttattttagcaggtgctggatcgggaaaaactagagttttaactcatagaattgca
tatctaatagaagagcttggagtttatccagggaatattctagcgattacatttacaaat
aaggcagcaaaagaaatgaagtacagagtagaagatttattaggaaggcctactgatata
tgggtaagcacttttcactctgcttgtgtaaaaattttaagaagagatatagaaaagata
ggttatacaaatgattttgtcatttatgatacatcggatcaaaaggtagtttttaaggaa
tgttataaagaattaaacataaatgataaattatatccacttcctatggttcagcataga
attagtgaagcgaaggataaaatgttaactccggaaaagtttataaaagagtatgctggc
gattttcaaatggagacaataggaaagatatataaactttatcagaaaaagttaaaaaag
aataatgcactagattttgatgatctaatttttaagactgttgaactatttgaaaatgac
aaagtaactctttcttattaccaaaataagtttcaatacataatggtagatgagtatcag
gatacaaatcagcttcaatataagttgatttctatgcttgcagcaaaacatggaaattta
tgcgttgtaggggacgatgatcaatgtattgtggaggggtgtaaagtagagacgcaagat
ggaaaaattgccatagaagaaattaaagagcatcaaaaggtgctttgtgcttcaggacaa
gcgaaaactatgataggtactgtagataagaaaatgaaaaaagaatataaaggacctatc
gtaaggattaaaacaaaatcaggaaaagaaatcaaaggtacaccgaatcatattggtttt
gcaagactgaatccacagcctggagtttattatgtgtatttaatgtataaaaaagggtat
ggatatcgtataggacaaacacagggtgtaagaagtagaaaaggtgaaattacaaatgga
ttggccgtaaggcttaatcaagaacatgcagataagatgtggattctaaaagtatgcttt
agtaaagatgaagcacacttttatgaacaattatatgcttttaaatatgggattcctaca
actgtatttcatgcaaatggaagaaaaatgacattattacaggaacatattgatgcaatt
tataaggaaattaacacagaaaaagctgcaattaatttaatgaatgatttatgtattttt
gaagaatatccacagcatttgtgtaatgcagttgttcgcggtcagtctataagaagaatt
gtaaatgttacttcctttggaggaagagaaactggattagatgctggttggcatggacat
agaatatgtttgaatacatcaggagaagatttaaaggaaaaagctagcaaagattttcct
gtaagggatggacaaagaaatacgtggagaatagaaacagaaagaaaagaatatgatgaa
gcttatttatatgcaagagaattagcacaactagatgatactattgatattgtaaaaaaa
gcaagattaacagagaaaaagagtttttattatatgccgttagctcatatgaagcctaca
atgcatgtagcagtatatgaagatggaaaaatcatagaagacattatagaagaagttgtt
tttgaagagtatgatggatatgtatatgatttatcagttcctcattttagacaatatata
tgtgaaggaattgttgtccataactctatttacagctggaggggtgcagatataagaaat
atcctaaattttgaggatgattttaaaaatgcaactgtaataaaactcgaacaaaactat
cgttcgacacaaaatatattagatgctgcgaactgtgttattaaaaataatagaagtaga
aaaaacaaaaaattatggacttctcaagaaagtggagaaatattaagatattatcgtgct
atgaatgaacatgatgaagcagggtttgttgtaaaacaaattaaagacatggtagaaacg
gatggaagaaactattcagaatttgctattctttatagaacaaatgcccagtctcgtgta
gttgaagaaatgctcatgaaagcagggattccttataggatttatggaggattaaagttc
tatgatcgtaaagaaataaaagatattattgcttatttgagattgattcaaaatcctgta
gatgatgtaagctttaaaagagtaatcaatgttcctaaaagagggattggagatagaact
gttgaaaaattagaacaaatggctaatcaaacaggagaaagtatatttagtgtaatccta
gatgatgaacttattcaaggtttttcaaaaagagtgaaagcaggaataaaggactttgca
ttattgattacgaaatatggaataatgaaggaagaaataggcataacagaacttattaaa
aatgtattgcaagagtcgggatatatggatgagcttcgtaatgaaaatacagtagaggct
gaagcgagaattgaaaacttgcaagaatttttatcggttgctatggactttgaaagaagt
agtgaagtaaatacattagaagaatttttatccaatatatcattagtatcagatttagat
acgatggatgatgaggaaaatgcagtagtgcttatgactcttcatagtgcaaagggctta
gagtttccagttgttttccttatagggatggaggagaggatatttccaatctcaagggct
ttagagagtgatcgagatttggaagaagaaagaagactttgttatgtaggaattactaga
gcagaagagatgttattcctaacccatgcaagaatgagaacattatatggaagaaccaac
tacaatccaatgtctagatttattgatgaaattgaagagcgtttgattgatatggataaa
gaggaaatgaagaagagagatcaaaaggctttagcaccaaacatagggatatatcgggga
gcaaccttaaaagagacaccaaaacctattaatacaggctcaaaggatgttaggccagga
agcaaagtaaaacatgacaaatttggcatagggacaataatttctgtaaagaaaagtaca
agtggtacagagttgacaattgcttttgataatgcaggaataaaaaagcttattaaagaa
tttgcaccaatttctgttatatag
DBGET
integrated database retrieval system
