KEGG   Chryseobacterium salivictor: NBC122_00419
Entry
NBC122_00419      CDS       T07515                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
csal  Chryseobacterium salivictor
Brite
KEGG Orthology (KO) [BR:csal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csal03400]
    NBC122_00419 (srmB)
Enzymes [BR:csal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NBC122_00419 (srmB)
    5.6.2.6  RNA 3'-5' helicase
     NBC122_00419 (srmB)
DNA repair and recombination proteins [BR:csal03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NBC122_00419 (srmB)
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII SNF2-rel_dom
Other DBs
NCBI-ProteinID: QBO57268
UniProt: A0A4P6ZCP5
LinkDB
Position
441995..444448
AA seq 817 aa
MTEKFKNSTGFQIIEKWMEDKDREPFGFQSETWYKFSQNYSGMVIAPTGFGKTFSVFLAV
VIDYMNNPDHYKSGMKLLWITPLRALAKDIAKAMSEALEEIGLDWEVAVRNGDTPKEIRA
KQTKKTPDILIITPESLHLLLAQKQHPKFFKNLQCIVVDEWHELLSSKRGVMTELAVSRI
FSYQNKIKIWGITATIGNLDEAMEVLIPYPIKKTKIVAKEKKKIEIKSVFPDDVEVLPWA
GHLGTKLADKIIPIILESQTTLVFTNTRSQAEMWYQVLLNEHPDFAGQIAIHHSSVDKDI
RIWIEENLSSGYLKAVISTSSLDLGVDFKPVDTVIQIGSSKGIARFLQRAGRSGHSPFET
SKIYFVPTHSLELIEVAALKEAVKQNKIEPREPLVLCYDVLLQFVLTLAVGDGFDEKETF
SQITQTNAFKELSPEEWNWILTFITVGGKLKNYEEYHKVVIENGLYKVISRRIAMLHRMN
IGAIVSDSMLKVKFFGGGYIGMIEEYFISKLNKNDKFVLAGRVLEVSHVKEMTVYVRNSS
GKGIVPSYLGGRLPLSSYLSGFLRQKLSESLNAKSSEKELRFLHPLLVSQQENSHIPSEN
EFLVERIKTREGHHLFMYPFEGRLIHEVMSALVAYRISRISPISFSIAMNDYGFELFSKI
EIPLSEENISEILSKEHLIRDVMASVNSTEMARRKFRDIAVISGMVIRTYPGQQKNNKNL
QSSSGLIFNVLEDYDPENLLFKQAYSEVFFQQIDEARLVEAFDRIHKSEIIIKNSNTFTP
LSFPIKVDSLRQSLSSEDLKARILRMKMEAMKKKMKK
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgaccgaaaaatttaaaaattccacaggtttccagatcatcgaaaaatggatggaagac
aaagaccgggaaccatttggttttcagtctgaaacatggtataaattttcccagaattat
tcgggaatggtgatcgcgccaacaggttttggaaaaacattctcggtttttttagccgtc
gtcatcgattatatgaacaatccggaccactacaaatccggcatgaaactgttgtggatc
actccactgcgcgctttagcaaaagatattgcgaaagcgatgagtgaagctctggaagaa
atcggattagactgggaagttgctgtgagaaatggtgatacacctaaagaaatccgggcg
aagcagaccaaaaaaacgcctgatattttaatcataacgcccgaaagtctgcatctgctt
ttagcacaaaaacaacacccgaaattttttaaaaatcttcagtgcattgttgttgatgaa
tggcacgagctgctcagttcgaaacgcggcgtgatgaccgaactcgccgtttcaaggata
tttagttatcagaacaaaataaaaatctggggaatcacagcaaccatcggaaatctggac
gaagccatggaagtccttattccctacccgattaaaaaaactaaaattgttgccaaagaa
aaaaagaaaatcgaaatcaaatctgttttccccgatgatgtcgaagttttgccttgggca
ggacatttaggaaccaaactcgctgataaaataattcccattattctggaaagtcaaaca
actttggtgtttaccaatacccgaagtcaggccgaaatgtggtatcaggttttgctgaat
gaacatcccgattttgcgggacagatcgcgattcatcacagttccgtggataaagatatc
cggatctggattgaagaaaatttatcttcaggatatttaaaagccgtcatctccacctca
tcgctggatttgggcgtagatttcaaacccgttgacaccgttattcagatcggctccagt
aaaggaattgcaagatttttacaacgtgccggacgaagcggacattcgcctttcgaaact
tcaaaaatctattttgttccaacccattctttagaacttattgaagttgcggctttgaag
gaagccgtgaaacaaaataaaatcgaaccgcgcgaacctctggttttatgttatgatgtt
ttacttcaatttgttttaacactcgcagttggagatggttttgatgaaaaagaaaccttc
agccaaattactcagacgaatgcttttaaagagttgtcacctgaagaatggaactggatt
ttaacgttcattacggttggcggaaaattaaaaaactacgaagaatatcataaagttgta
attgaaaacggtctgtataaagttatttcacgcagaattgcaatgctgcaccggatgaat
attggcgcgattgtaagcgattccatgttgaaagtaaagtttttcggcggcggatatatc
ggcatgatcgaagagtattttatttctaaattaaataaaaatgataagttcgttttggcc
ggaagagttcttgaagtttcccacgtcaaagaaatgaccgtgtacgttcggaactccagt
ggaaaaggaatcgtcccgagttatttgggcggaagattacctttatcctcctatttgagc
ggttttctgagacaaaaactttcagaatctctcaacgcgaaatcttctgaaaaagaactg
cggtttttgcatccgcttctggtcagccaacaggaaaactcacatattccaagcgaaaac
gagtttctggtcgaacgcatcaaaacccgcgaaggccatcatctgtttatgtatccgttt
gaaggcagattgattcacgaagtgatgtcggccttggttgcctatcgaatttccaggatt
tcacccatttctttttcaattgcgatgaatgattatggttttgaattattttcgaaaatc
gaaattccgttgagtgaagaaaatatttcagaaatattatccaaagaacatttaatccgc
gatgtaatggcgtcagtcaattcaacggaaatggccaggcggaagtttcgggatatcgca
gtaatttctggaatggtcatcaggacgtatccgggacagcagaaaaataataaaaattta
cagtcatcttcaggtttaatatttaatgtgctggaggattacgatcccgaaaatttatta
tttaagcaggcatattccgaagttttttttcagcagatcgatgaagcgagattggtcgag
gcctttgaccgtattcataaaagtgagattattattaaaaattcaaatacctttactccc
ttaagttttcctattaaagttgacagtctgcgccaaagtttgagcagcgaagatctgaaa
gcccgtattctgagaatgaaaatggaagccatgaaaaagaaaatgaaaaaatga

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