Camelina sativa (false flax): 104711301
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Entry
104711301 CDS
T05044
Name
(RefSeq) histone deacetylase 7
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104711301
03083 Polycomb repressive complex
104711301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104711301
Enzymes [BR:
csat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104711301
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104711301
HDAC complexes
Sin3A-HDAC complex
104711301
BRAF-HDAC complex
104711301
REST complex
104711301
SHIP complex
104711301
MiDAC complex
104711301
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104711301
Heterochromatin formation proteins
Other heterochromatin formation proteins
104711301
Chromatin remodeling factors
NuRD complex
104711301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104711301
NCBI-ProteinID:
XP_010426293
LinkDB
All DBs
Position
9:complement(18366298..18368105)
Genome browser
AA seq
425 aa
AA seq
DB search
MASLASGPDGGKRRVSYFYEPKIGDYYCGVNQPTKPQRIRVTHNLVLSYNLHRYMEINRP
DLAAASDFEKYHSPEYVEFLKSVTPETLDDPSVSQNLKRFNVDVDWDGPVFHNLFDYCRA
YAGGSISAAAKLNRQEADIAINWAGGMHHAKKDKASGFAYVNDVVLGILELLKAFKRVLY
IDIGFGHGDGVEEAFKDTDRVMTVSFHKTGDTGDICDFGEGKGQYFSLNAPLKDGLDDFS
LRSLFVPVIHRAMEIYQPEVIVFQSGTDSLVGDPLCTFNLSIKGHGDCLQYVRSLNVPLL
VLGGGGSTIPNVARCWCYETAIAVGEQLDNDIPANEYMKYYRPDYKLHILPTNRQNLNTP
GDIMTMRDKLLAQLSQVMHAPSVQFHDTPSSSSQATEAAEVDMEKRQNPLILSGNPCYES
DCNED
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttagcgtcaggtcccgacggaggaaaacgccgcgtgagctacttctacgag
ccaaagatcggcgactactactgtggcgtcaaccagccaacgaaacctcaacggatccgt
gtcactcacaacctcgtcctcagctataacctccaccgctacatggaaatcaaccgccca
gaccttgccgctgcttccgatttcgagaaataccactcgccggaatatgtcgagttcctt
aaatccgtcacgccggaaaccttagacgatccttccgtctctcaaaacctcaagcgcttc
aacgtcgatgttgattgggatggtcctgtcttccataacctcttcgattactgccgcgct
tacgctggtggttctattagcgccgccgcgaaactgaaccgtcaggaagctgatatcgcc
atcaactgggccggtgggatgcaccatgcgaagaaagataaggcttctggctttgcctat
gtcaatgatgttgttcttgggattctcgagttgctcaaggctttcaagagagttctgtac
atagatattggctttggtcatggggatggagtggaagaagcatttaaggacactgataga
gttatgactgtttctttccacaaaactggggacaccggagacatatgtgactttggggaa
gggaaaggacaatacttttctctgaatgcgccactaaaggatggtttggatgatttcagt
cttcgtagtttgttcgtacctgttatccacagggctatggaaatctatcagccagaagta
attgtttttcagagtggtactgattcattagttggtgatccgttgtgtacattcaacttg
tctatcaagggtcatggtgattgcctacagtacgtgagatctttgaatgttcctctcttg
gtcttgggtggtggaggttctactattccaaatgttgcccgttgctggtgctatgagaca
gctattgcggttggagaacagcttgacaatgatatcccagccaatgagtacatgaagtat
taccgtccagattacaagcttcacatattgccaaccaacaggcagaatttaaacacacca
ggagatattatgacaatgagggacaaattactagcgcaactttcacaagtgatgcacgca
cctagtgtacagtttcatgacactccatcatcaagcagtcaagccactgaagcggctgaa
gtagacatggagaagagacagaatccactcattttgagtggcaatccatgttatgaatca
gattgtaacgaggattag
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integrated database retrieval system