Camelina sativa (false flax): 104711476
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Entry
104711476 CDS
T05044
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
csat
Camelina sativa (false flax)
Pathway
csat04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104711476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104711476
03029 Mitochondrial biogenesis [BR:
csat03029
]
104711476
Membrane trafficking [BR:
csat04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104711476
Atg1 complex
104711476
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104711476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104711476
NCBI-ProteinID:
XP_010426480
LinkDB
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Position
9:20214013..20216773
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AA seq
617 aa
AA seq
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MDFPENLPSEDVGRLEQIVSHFFPKALHIVLNSRIPSLQSRGRTRERCLSSSSGAGLNNN
NVRKSDKWFNLVMGDRPAALEKLHSWHRNILDSMIIDIILVHPTTTIPTHDDDHHHHDVR
SAETVIERWVVQYENPLIMSPQSSESVTRYQKVYKKSIIMLRSLYAQTRLLPAYRVSRQL
SSSLASSGYDLVYKVSSFSDILSGPVTETMKEFRFAPVDVPPGRLCASVTYRSDLSDFNL
DTHITLPPRIITDYVGSPATDPMRFFPSPGKSIEGTSFIGRAGRPPLTGSSAERPHSWTS
GFHRPPAQFPTPNQSFSPAHSHQFSPGLHDFHWSRTDGFGGDSHQLSPPFSPSGSPSTPR
YISGSNSPRINVRPGTAPVTIPSSATFNRYVSSNFSEPSRNPLPPFSPKSTRRSPSSQDS
LPGIALYRSSRSGESPSGLMNQYPAQKLSKDSKYDSGRFSGLLSSSGSPRFGFSRSPSRL
SSQDDLDDPDCSCPFDFDDVDESGLQYSQSLDRRKASSSISQSLPIGRKSSQDAAVGVLV
HMLKTAPPLRQDSSTYMASMSGVQREGSVSVSVSGTESEFSMARSTSDALEELRNYKQLK
DLLLSKSKSGSGATRVH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatttcccagagaatttgccatcggaggatgtagggagattagagcagatagtatct
catttcttcccaaaggcattacacatagttctcaattctaggatcccttcgttgcaatct
cgtggtcgtactcgtgagcgttgtttatcatcatcatcaggagcaggtcttaataataat
aacgttaggaaaagtgataaatggttcaatcttgttatgggagatcgtcccgctgcgtta
gagaagttgcattcttggcataggaatatcttggattctatgattattgatatcatactc
gttcatcccaccaccaccattcccactcatgatgatgatcatcatcatcatgatgttaga
tcagctgagactgtgattgagaggtgggttgttcagtatgagaatcctttgattatgtct
cctcagagttctgagtctgtgactcgttatcagaaggtttacaagaagtctatcattatg
ttgcggtctctttatgctcagactcgtcttctccctgcttatcgtgtctctaggcagctt
agttcgtctcttgcctcttctggttatgatcttgtttacaaggtttcgtctttcagtgat
atactctctggtcctgtgactgagactatgaaagagtttcgctttgcacctgttgatgtg
cctcctggtcggctttgtgcctctgttacttaccgttctgacttatctgatttcaatctt
gatactcacatcacattgcctccaagaattataaccgattatgttggaagtcctgctaca
gatcctatgaggtttttcccgtctccagggaaaagtattgaaggcacatcttttattggt
agagctggtcgtcctcctttgactggttcttctgctgaacgtccacatagctggaccagc
ggctttcacagacctccagctcaattcccaacaccaaaccagtctttttcccctgctcat
tcacatcaattttcacctggtttacacgatttccactggtcacgtacagatggttttggt
ggtgacagtcaccagctctcacctcctttttcgccatcgggttctccctctactccaaga
tacatttcagggagtaacagtccacggattaatgtgagaccagggactgctccagtgacc
attccttcttcagccactttcaacagatacgtttcatctaacttctctgagccaagtagg
aatccactccctcccttttcccccaaaagcacaaggcgctccccttcatcgcaggactct
ttgcctgggattgccttgtacaggagttcgagaagcggagagtctccttctggattaatg
aaccagtaccctgcccagaagctgtcaaaggacagcaaatacgattcaggacgcttctct
gggcttctgtcttcaagtggctcaccaagattcgggttttctaggagtcctagtagatta
tcgtcccaagacgacttggatgaccctgactgttcatgcccttttgatttcgatgatgtt
gacgagtcaggacttcagtacagccaaagtcttgaccggaggaaagcttcaagctctata
tcacagtcgctacctatagggagaaagtcatcacaggacgcagcggttggtgttctggtt
cacatgctgaagacagcaccgccattgcgacaagactcaagcacttacatggcatcaatg
tctggggtccagagagaaggttcagtatcagtgtcagtgtcaggaactgaatctgaattt
tcgatggctcgaagcacatcagatgcactagaggagctgagaaactacaagcagctcaaa
gacttgcttctatcaaaatccaagagtggatctggagcaactcgtgtccactga
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