Camelina sativa (false flax): 104717707
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Entry
104717707 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH3-like
KO
K08736
DNA mismatch repair protein MSH3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104717707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104717707
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104717707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
104717707
NCBI-ProteinID:
XP_010433619
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All DBs
Position
10:7272104..7277954
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AA seq
1094 aa
AA seq
DB search
MKKTNMGKQKQQTISRFFAPKPKSPTQEPVPVAESSSPAPKISATVSFSPSKRKLLSDHL
SAASPKKTKLSPHTQNPIPDPDLHRRFLQRFLEPSPEESVPETSSSARKYTPLEQQVVEL
KNKYPDVVLMVEVGYRYRFFGEDAEVAARVLGIYAHMDHSFMTASIPTFRLNFHVRRLVN
AGYKIGVVKQTETAAIKSHGANRGGPFFRGLSALYTKAMLEAAEDISGGCVGEEGFGAQS
NFLVCVVDERVDPEAFGLGMEMSFDVRVGIVGVEISTGEVVYGEFNDNFMRSGLEAVILS
LSPAELLLGQPLSQQTEKFLLAHAGPTSNVRVERASLDRFRSGSAVDEIISLCEKISANN
LVDDKELKVETAEEGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFRTL
SSSTEMTLSANTLQQLEVVRNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCNRNL
ISARLDAVSEIAACMGSYSSSQKIDELVEEGSERTTVSPEFYFVLSSVLTSLSRSSDIQR
GITRIFHRTAKVTEFIAVMEAILLAGKQLQRLGVKQDCGMTTQSTTVQSSLLRKLISVVS
SPAVVDNAVKLLSALNKEGAVRGDLLDILITSSGQFPELAEARQAVLIVSEKLDSSIDIF
RKKLAMRNLEFLQVSGITHLIELPVDAKVPVNWVKVNSTKKTIRYHPPEIVAGLDELALA
TEHLAIVNRASWDSFLKSFSRYYTDFQAAVQALAALDCLHALATLSRNKKYVCPVFVDDC
EPVEINIQSGRHPVLETILQDNFVPNDTSLHAEREYCQIITGPNMGGKSCYIRQVALISI
MAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVIL
DELGRGTSTHDGVAIAYATLRHLLTEKKCLVLFVTHYPEIAEINNGFPVAVGTYHVSYLT
SQKDESGFDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCVRRAITMAAKLEAEVCER
EKNTRMESLRGEPKGHEEDPVHGDPEDSKSLEESVIGLDDFFADLKLALSQEENPLKSFE
FLNRAWKIAAKESV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacaaatatggggaagcaaaagcagcagacgatttctcgattcttcgctccc
aaacctaaatccccaactcaggaaccggttccggtggctgaatcatcatctccggcaccg
aagatatccgccactgtctctttttctccttcaaagcgtaagcttctctccgaccacctc
tccgccgcgtcacccaaaaagactaaactttctcctcacactcaaaaccccatacccgac
cctgatttacaccgaaggtttctccagaggtttctggaaccctcgccggaggaatctgtt
cccgaaacgtcatcatcagcgaggaagtacacgccattggaacagcaggtggtggagcta
aagaacaagtacccagatgtggttttgatggttgaagttggttataggtacagattcttt
ggagaagacgctgaggttgcagcacgtgtgttgggtatttacgctcatatggatcatagt
ttcatgacggcgagtataccaacatttcgattgaactttcatgtgaggagattggtgaat
gcagggtacaagattggtgtggtgaagcagactgaaactgctgccattaagtcccacggt
gctaaccggggaggcccttttttccggggactatcggcgttatatactaaagccatgctt
gaagcggctgaggatataagtggtggttgcgttggtgaagaaggttttggtgcacagagt
aatttcttggtttgtgttgttgatgagagagttgacccggaggcatttggtttaggtatg
gaaatgagttttgatgttagagttgggattgttggcgttgagatttcaactggtgaagta
gtttatggagagtttaatgataatttcatgagaagtgggttagaggctgtgattttaagc
ttgtcaccagctgagctgttgcttggccagcctctttcacaacaaactgagaagtttttg
ttggcacatgctggacctacctcaaatgttcgagtggaacgagcctcactggatcgtttc
cgcagtggtagtgcagtagatgagattatttcattatgtgaaaaaatcagcgcaaacaac
ctagtagatgataaagaactcaaggtggagactgctgaagaaggaatgtcttgtttgaca
gttcacacaattatgaacatgccacatctgactgttcaagcccttgccctgacattttgc
catctcaaacagtttggatttgaaaggatcctttaccagggggcttcatttcgcactttg
tcaagcagcacagagatgactctctcagccaatacactgcaacagttggaggttgtgaga
aataattcagatggatcggaatctggctccttattccataatatgaatcacactcttaca
gtatatggttccaggcttcttagacactgggtgactcatcctctttgcaatagaaatctg
atatctgctcgccttgatgctgtttctgagattgctgcatgcatgggatcttatagttct
tcccagaagatcgatgagttggttgaagaaggttctgagagaacaactgtatcacctgag
ttttatttcgttctctcctcagtcttgacttctttgtctagatcatctgatatccaacgt
ggaataacaagaatctttcatcggactgctaaagtcacagagttcatcgcagttatggaa
gctattttacttgcggggaagcaacttcagcggcttggcgtaaagcaagactgtggaatg
actacgcaatccacaactgtgcagtcttctcttttgagaaaattgatatctgttgtttca
tctcccgctgtggttgacaatgccgtaaaacttctctctgccctgaataaggaaggggct
gttcgaggagacttgctcgacatactaatcacgtccagcggccaatttcctgagctagct
gaagctcgtcaagcagttttaatcgtcagcgaaaaacttgattcctcgatagatatattt
cgcaagaaactcgcaatgcgaaatttggagtttcttcaagtgtccgggatcacacatttg
atagagctgcccgttgatgccaaggtgcctgtgaattgggtgaaagtaaatagcaccaaa
aagactattcgatatcatcccccggaaatagtagctgggttggatgagctagctctagca
actgaacatcttgccattgtgaaccgagcttcgtgggatagttttctcaaaagtttcagt
agatactatacagatttccaggctgccgttcaagctcttgctgcgctagactgtttgcac
gcccttgcaactctatctagaaacaagaagtatgtctgtcccgtgtttgtggatgactgt
gaaccagttgagataaacatacagtctggtcgtcatcctgtattggagactatattacaa
gataacttcgtcccaaacgacacaagtttgcatgcagaaagggaatactgccaaattatc
accggacctaacatgggaggaaagagctgttatatccgtcaagttgcattgatttccata
atggctcaggttggttcctttgtaccagcttcattcgccaagctgcacgttcttgatggt
gttttcactcggatgggtgcttcagacagtatccagcatggtcgaagtacctttctggaa
gaattaagtgaagcgtcacacataatcagaacctgctcttctcgttcgcttgttatatta
gatgagcttgggagaggcactagcacacacgacggtgtagccattgcctatgcaacatta
cgacatctcctaacagaaaagaaatgtttggttctttttgtcacgcattaccctgaaata
gctgagatcaataacggcttcccagttgctgttgggacataccatgtctcgtatctgaca
tcgcagaaggatgaaagtggttttgatcatgatgatgtgacctacctatataaacttgtg
cgtggcctttgcagcaggagctttggttttaaggttgctcagcttgcccagatacctcca
tcgtgtgtacgtcgagccataaccatggctgcaaaattggaagctgaggtatgtgaaaga
gagaaaaacacacgcatggaatcactcagaggagaaccaaaaggtcatgaagaggatcca
gtacatggtgaccctgaagattcaaaaagcttagaagaatctgttattggtttagatgac
ttctttgcagacctgaaacttgctctctctcaagaggagaatcctttgaaatcattcgag
tttttaaaccgtgcgtggaagattgcagcaaaagaatcagtgtag
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