Camelina sativa (false flax): 104719075
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Entry
104719075 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104719075
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104719075
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104719075
03019 Messenger RNA biogenesis [BR:
csat03019
]
104719075
03041 Spliceosome [BR:
csat03041
]
104719075
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104719075
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104719075
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104719075
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104719075
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104719075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104719075
NCBI-ProteinID:
XP_010422072
LinkDB
All DBs
Position
8:18002349..18004609
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AA seq
322 aa
AA seq
DB search
MDKTLLDDIIRRLLATNSGRTVKQAQITEAEIRQLCLASKEVFLSQPNLLELEAPIKICG
DVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKVKYKFNFFLLRG
NHECASINRVYGFYDECKRRYNVRLWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSL
DDIKRIPRPIDVPDQGILCDLLWADPDREIQGWGENDRGVSYTFGADKVAEFLQTHDLDL
VCRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKASEKKG
RFGFNNNVPRPGTPPHKGGKGG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacattacttgacgatataatacggcggcttttagcgacgaatagtggaaga
acggtgaagcaagcacagattactgaggcggagatacggcagctatgtttggcttccaaa
gaggtttttctcagccagcctaatctccttgagcttgaggctcctatcaagatttgcggg
gatgttcatgggcagtttccagaccttttgcggttgtttgagtatggtggctatccgcca
gctgcaaattacttgttcctcggggattatgttgatcgtggtaagcagagcatagagacg
atatgccttcttcttgcctataaggtcaaatacaagttcaacttctttcttctcagaggc
aatcacgaatgtgcttcaatcaaccgtgtgtacggattctacgatgaatgcaaaagaaga
tacaatgtccgcctttggaaaactttcactgagtgcttcaactgtcttcctgtttctgct
ctcattgatgataagatcctttgcatgcatggtggactatcgcctgatattaagagctta
gatgacatcaagagaattcctcgtcctattgatgttcctgatcagggaattctttgtgac
ttgttatgggctgatcctgacagagagattcaaggctggggggagaatgacagaggtgtc
tcatatacttttggggctgacaaagttgctgagttccttcaaactcatgaccttgatctt
gtatgccgagctcatcaggttgtagaagatggatatgagttctttgcaaagagacaactg
gtgacagtattctctgcacccaattactgtggcgagtttgacaatgctggcgcaatgatg
agtgttgatgatagcttaacatgttcattccaaatccttaaggcatctgagaagaaagga
agatttggattcaacaacaatgttcctagaccaggaaccccacctcataagggtggaaaa
ggtggttaa
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