Camelina sativa (false flax): 104724548
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Entry
104724548 CDS
T05044
Name
(RefSeq) crooked neck-like protein 1 isoform X2
KO
K12869
crooked neck
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104724548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104724548
03036 Chromosome and associated proteins [BR:
csat03036
]
104724548
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104724548
Complex C
104724548
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104724548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
Suf
TPR_19
TPR_17
RNase_H2_suC
Motif
Other DBs
NCBI-GeneID:
104724548
NCBI-ProteinID:
XP_010441350
LinkDB
All DBs
Position
11:28901537..28905357
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AA seq
705 aa
AA seq
DB search
MASGGKDSDRTLGYMTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPP
KQKITDSTELSDYRLRRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARSVWERAIE
GDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGAR
QIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFVLCHPRVSAYIRYAKFEMKGG
EVARCRGVYERATEKLADDEEAEQLFVAFAEFEERCKEVERARFIYKFALDHIPKGRAED
LYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYVRLEESVGNKDRI
REIYERAIANVPPADEKRYWQRYIYLWINYALYEEIENEDVERTRDVYRECLKLIPHNKF
SFAKLWLLAAQFEIRQLNLTGARQILGNAIGQAPKDKIFKKYIEIELQLGNMNRCRKLYE
RYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEIAEG
ELERTRALYERLLDRTKHYKVWVSFAKFEASAAELEEDENEDEEQEEGVLEHKKDCIERA
RAIFDRANTYYKDSAPELKEERATLLEDWLNMETRFGNLGDVSIVRSKLPKKLKKRKQIS
REDGSTEYEEYIDYMYPEESQTTNLKILEAAYKWKKQKVAASEDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcggcaaagattccgatcgtaccttagggtacatgactcggaaagatact
gaagtcaagcttccaagacctactcgtgtcaagaacaaaactccggcgccggttcaaatc
accgccgaacagattttaagagaagctcgtgagagacaagaagctgagatccgtccgcct
aagcaaaaaatcactgactccaccgagctctccgactacagactccgccggagaaaggaa
tttgaggaccagatccgtcgcgcgagatggaacattcaagtttgggtcaagtacgctcaa
tgggaagagtcgcagaaggactacgctcgtgctcggagtgtatgggagcgagccatagaa
ggagactacaggaaccatacgctttggctcaaatacgctgagttcgagatgaagaacaag
tttgtcaacagtgccagaaacgtttgggatcgagctgttacgcttcttcctcgtgttgac
cagctttggtacaagtatattcatatggaggagatacttggcaacatcgccggagctaga
cagatttttgaacggtggatggattggtctccggatcaacaaggttggctctcgttcatt
aaattcgaacttaggtataacgaaatagaacgtgctagaaccatctacgagagatttgtt
ctttgtcatcctagagtatctgcctatattagatatgctaagtttgagatgaagggtggg
gaagttgcgcgttgtaggggtgtctatgaacgtgccacagagaagctagctgatgatgaa
gaagctgagcagctctttgtggcgtttgctgagtttgaagaacgctgtaaggaagtagaa
agagctaggtttatctacaagtttgctcttgatcatattcctaaaggaagagctgaggat
ttgtatagaaagtttgtggcttttgagaagcagtatggtgataaggaagggattgaggat
gccattgttgggaagaggaggtttcagtatgaagatgaagtaaggaagaatcctttgaac
tatgattcgtggttcgattatgttaggttagaggagagtgtggggaacaaagataggatt
agagaaatctatgagagggctattgctaatgttccaccagctgatgagaaacgttactgg
caaagatatatctatctttggattaattatgcattgtatgaagagatcgaaaatgaagat
gttgagcgtacccgagatgtttacagagagtgcctcaagcttatcccccacaacaaattt
tcttttgccaaactatggttgctcgctgctcagtttgagataaggcaattgaatctcacg
ggtgctcggcagatattaggaaatgcgattgggcaagctcccaaagataagatcttcaag
aaatacattgagatcgagcttcagttgggaaacatgaataggtgtagaaagttatatgaa
cggtaccttgagtggtcccctgagaattgctatgcctggagcaagtatgctgaattagag
aggtctcttgttgaaacagaaagagctagagctatttttgaacttgcaatatcccagcca
gctcttgacatgcctgagctgctatggaaggcatacattgattttgagatagcagaaggg
gaattagagaggaccagagctttgtatgagcgactcttggaccgtactaagcattacaag
gtgtgggttagctttgcaaagtttgaagcttctgctgcagaactagaagaagatgagaac
gaagatgaagaacaagaagaaggtgttcttgaacacaaaaaggactgtatcgaacgtgcc
agagcaattttcgatagagccaacacatactacaaagactcggcaccggagctgaaggaa
gaacgagcaacactcctggaggattggctgaatatggagacgaggtttgggaacctcggg
gatgttagtattgttcgatcgaagcttccaaagaagctcaagaagagaaagcagatcagt
agagaagacggttcaacagaatacgaagaatacatcgattacatgtacccagaagaatcg
cagacaacgaatctcaagattctcgaagctgcatacaaatggaagaaacagaaggttgct
gcttctgaagatgattaa
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