Camelina sativa (false flax): 104752408
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Entry
104752408 CDS
T05044
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104752408
09124 Replication and repair
03420 Nucleotide excision repair
104752408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csat03051
]
104752408
03400 DNA repair and recombination proteins [BR:
csat03400
]
104752408
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104752408
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104752408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
CUE
TECR_N
UBA_3
MmeI_C
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
104752408
NCBI-ProteinID:
XP_010472832
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Position
16:complement(25393175..25396221)
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AA seq
369 aa
AA seq
DB search
MKLTVKTLKGNHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKFLKDETSLV
ENKVTEEAFLVVMLSKSKTAGSAGQSSAQPASSTSSTTSLAKPAAPSTSQSTAVPASLIP
AQQQPGVPTDDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERA
VDYLYSGIPETAEVAVPVPGAQLAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGSGDLG
TLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEG
SDGDADMFDQPEQEMPHAVNVTPAEQEAIQRLEAMGFGRALVIEAFLACERNEELAANYL
LENSGDFED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgttaagactctcaagggtaatcattttgaaattagggttctaccctcc
gatacgataatggcggtgaagaagaatatagaggattcacaaggcaaagacaattatcct
tgtggccagcaactgttgattcacaatggaaaatttttgaaggatgaaactagcttggtt
gagaacaaggttaccgaggaagctttcctcgtcgttatgcttagcaagagcaaaaccgca
ggttcagctggtcagtcttcggctcagcctgcttcctctacctcgtctactacatctttg
gctaagcctgcagcaccatctacatcccagtctacagccgtgcctgcttcacttattcct
gctcaacaacaaccaggggtaccaactgacgacacctatggacaagctgcgtcaacattg
gttagtggcagtagtcttgagcaaatggtccaacagataatggaaatgggaggcggaagc
tgggacaaagaaacagttactcgtgcacttcgtgcagcttacaacaaccctgagagagca
gtggattatttgtattccggaattcctgaaactgctgaagtagctgtgcctgtacctggg
gctcagttggcaggatctggtgcagcccctgtcgcacctgcatctggaggacctaactca
tctcctttggatttattccctcaggaaacagttgctgctgctggatctggtgatcttggg
acgcttgaatttcttagaaacaatgaccagttccaacaattacgcaccatggtccattcc
aaccctcaaattctccagcccatgcttcaggaacttggaaagcaaaacccccaacttctg
aggctaattcaggagaaccaggcagagtttcttcagttagtaaacgagccctatgaggga
tctgacggggatgcggatatgttcgatcaacccgagcaagaaatgccacatgccgtaaat
gttaccccagcagagcaagaagcgattcaacggctagaggcaatggggtttggtagagcc
ttagtaatagaagccttcctagcatgtgagcgtaacgaagaattggcagctaactatcta
ttggagaactcaggagattttgaagactga
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