Clostridium saccharobutylicum: CLSA_c21340
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Entry
CLSA_c21340 CDS
T02876
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03420
Nucleotide excision repair
csb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSA_c21340
03430 Mismatch repair
CLSA_c21340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c21340
Enzymes [BR:
csb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSA_c21340
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSA_c21340
MMR (mismatch excision repair)
Other MMR factors
CLSA_c21340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
SLFN-g3_helicase
AAA_22
Ribonuc_red_2_N
Motif
Other DBs
NCBI-ProteinID:
AGX43114
UniProt:
U5MQN5
LinkDB
All DBs
Position
2413560..2415785
Genome browser
AA seq
741 aa
AA seq
DB search
MNVSQNMELENKELILSKKFYKKLANERDKRKRELILNKMKSFEIILLKSKSKSDIPKAI
WIRRIVGTNIYKFRVNSGDRILFQYIEDEDENRILFLDFCNHDSQIRTAKNQVLCMSTVG
LEINDKYEYKEDDFDKEIDEEINNDIYGRLETLKQNSVIEDEYICVSIDEGDMEFLSFEQ
YECISNRNKQSDLILGCAGSGKTVVAIRKLILNKEENLKSIYITCSNMIVDRAKDIYYRF
IEKDNMTSFYTLRNLCFEIIGLKNPIIIEYKDFYEWFFNYALVKEYINKVDVKEIWIEIC
SLIKGTAGKKQDSKELEGIISEDEYYNSEESHHDLKTRKIIYRIARIYQYWLKNNKYYDD
NDLAMLSLKKITSKYKYDYVIYDEIQDLTELQLNFIYSIARNVNNIMLIGDIDQSINISK
LNLDFLKNMTYESNSKLSEKFIIKNYRNGSETINWINAFKQIKFSKFKSMGKNFEQEEEY
IKEGTKPKIIYNVKNQIKILSNVDEDVNSIIIVPDESDKKELEDMGYTLGRVFSVEDVRG
LEYDNIYCYNILSKFNYIWEKVLSNNSKLEDIYRIYFNMVYIAVTRAKNKVVFIEKTIPV
LDSVLQKHWDKIDYESEIAMNTNKMNIKPWYKGFMLETKNSVQENEFDEDTSKVPETESF
KESAAAGIGGFIGALISGGLIGGILGIEKVDEWSQEAEKLERTGNYYQAAYAYKKAGRQA
DAKRCVREHEVKLSYEVNIQN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcacaaaacatggaactagaaaacaaggagcttatacttagcaaaaagttt
tacaaaaaactagctaatgaaagggataaaagaaaaagagagcttatattaaacaaaatg
aaaagttttgaaattattttgctgaaaagtaaatcaaaatcagatataccaaaagctatt
tggataagaagaatagttggaacaaatatatataaatttagagttaatagtggtgataga
attctatttcagtatatagaagacgaagatgaaaataggatcctttttttagatttttgt
aatcatgatagtcaaatccgtacagctaaaaatcaagtgttgtgtatgtctactgttgga
cttgaaattaatgataaatatgaatataaagaagatgattttgataaagaaattgatgaa
gaaattaacaatgatatatatggaagacttgaaacactcaagcaaaattcagttattgaa
gacgaatatatttgtgtgtcaattgatgaaggagatatggaatttttaagttttgaacaa
tatgaatgcatatcaaatagaaataagcaatcagatttaatattaggatgtgcaggcagt
ggtaaaactgttgttgcaataagaaaattgattttaaacaaggaagaaaatttaaaatca
atttatataacctgttctaatatgatagttgatagggcgaaagatatatattatagattt
attgaaaaagataatatgacatctttttataccttaagaaatttgtgctttgaaattata
ggactcaaaaatccaataataattgaatataaagatttttatgagtggttttttaattat
gctttagtaaaggaatatataaataaagttgatgtgaaagaaatttggatagaaatatgc
tctcttattaaaggaactgcaggtaaaaagcaggattctaaagaattagaaggtattata
agtgaagatgagtattataattctgaagaatctcatcatgacttaaagactagaaagata
atatataggatagcaagaatatatcaatattggttaaaaaacaataaatattatgacgat
aatgatttggcaatgttatctttaaaaaaaataacatcaaaatacaaatatgattatgtg
atttatgatgaaattcaagatttaactgaactacaattaaattttatatattcgattgcc
agaaatgtaaataatataatgttgattggagatatagatcaaagcatcaatataagtaaa
ttaaacttagatttcctaaaaaatatgacctatgagagtaattcgaaacttagtgaaaaa
tttataattaaaaattatagaaatggatctgaaactataaattggattaatgcttttaaa
caaattaaatttagtaaatttaaaagtatgggaaaaaacttcgaacaagaagaagagtat
attaaggaaggaactaaacctaaaataatatataatgttaaaaatcaaattaaaattcta
agtaatgtggatgaggacgttaatagtataataatagttccagatgaaagcgataaaaaa
gaattggaagatatgggttatacattaggaagagtattttctgtagaagatgtaagagga
ttagaatatgataatatctattgttataatattttatctaagttcaattacatatgggaa
aaggtattatctaataattcaaagttagaggatatatatagaatatattttaatatggtt
tatatagctgtaactagagcaaaaaataaagtcgtttttattgaaaaaactattccggta
ctagatagtgtactacaaaaacattgggataaaattgattatgaaagtgaaatagctatg
aatactaataaaatgaatattaaaccatggtataaaggtttcatgttagagactaagaat
tcagtacaagaaaatgaattcgatgaagatacaagtaaagtaccagaaactgaaagtttt
aaggaaagtgcagctgctggtataggaggtttcattggagctctaatatcaggagggtta
attggaggaatacttggaattgaaaaagtggatgaatggagccaagaggcagaaaaactt
gaaaggacgggaaattattatcaggcagcttatgcatataaaaaagctggaagacaagct
gatgcaaaaaggtgtgtaagagaacatgaagtaaagctaagttatgaagtgaatatacag
aattag
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