Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_1975
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Entry
Clst_1975 CDS
T02527
Name
(GenBank) antitermination factor NusB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csd03009
]
Clst_1975
Enzymes [BR:
csd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Clst_1975
Ribosome biogenesis [BR:
csd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Clst_1975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltr_RsmF_N
FtsJ
Ubie_methyltran
NSUN5_fdxn-like
Methyltransf_15
Methyltransf_25
TRM
Motif
Other DBs
NCBI-ProteinID:
AGI40014
UniProt:
L7VQT5
LinkDB
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Position
complement(2239213..2240562)
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AA seq
449 aa
AA seq
DB search
MDKARETALKAIYETDIKGAYANLELKKLLADKELNSRDRAFITELVYGTVTRKLTLDWI
ISHFSKIQLKKMSNLVLQILRMGTYQIMFLDRVPPSAACNTSVELAKRYAKQSSGFVNAV
LRNIARNKERISFEDIDAPTVSEKLSIKYSFPEYLVREWISVFGENFTEELLKAFLERPD
FSVRINTLKTTKESVVEDLNSHGIETLPGRYLDEALYLKNISDISNLDAFQKGKITVQDE
SSMIVARILDPKPGEKILDTCAAPGGKTTHIGQLMQNRGHIDAWDVHEHKIALINENAKR
LGVEIINASQQDALYLLNEAKGVYDRVLVDAPCSGTGIIRRKPDIKWKRKKEDLSNLVEI
QKKILYNAGRYVKPGGVLVYSTCSVDVRENEEVVKFFLAENGDFKRESVKELLPQALKEK
AGVDEGMLRLYPHIDGTDGFFIARMRKIR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcaagggaaacggctttaaaagccatatatgaaactgatataaagggcgcg
tatgccaacctggaacttaaaaaacttttggccgacaaggagctgaattccagggacagg
gcctttataaccgaactggtttacggcactgtcacgcggaagcttacgctggattggata
atttcacatttttcaaagattcagcttaaaaagatgtccaatcttgtgctgcagatttta
agaatgggtacataccagattatgtttctggacagagttcccccgtctgcagcctgcaat
acttcggttgaacttgcgaaaagatatgccaagcagtcgtcgggctttgtaaatgcagta
ctgagaaatatagcaagaaataaggaaaggatttcatttgaagatattgatgcccctact
gtttccgaaaaactgtcgatcaaatattctttccctgaataccttgtacgggaatggatt
tcggtctttggtgagaattttaccgaagaacttttgaaagcgtttttggaacgccccgat
ttttcggttcgcattaatactttaaaaactacgaaagaatccgttgtggaagatttaaac
agtcatggaattgaaactttaccgggacgttatcttgacgaggctttgtaccttaaaaac
atatcggatatttcaaaccttgacgcctttcaaaaagggaaaataaccgtccaggatgaa
agctcgatgattgtggcgagaatacttgatccaaaaccgggtgaaaaaatactggatact
tgcgcggctccgggaggaaaaaccacgcacatagggcagcttatgcagaacagagggcat
attgatgcatgggatgtccacgagcataagatagcccttataaatgaaaatgcaaaaagg
cttggcgtcgaaattataaatgcttcgcagcaggacgcgctgtatctcctgaatgaggct
aagggtgtttatgacagagttctggttgatgccccctgttcaggaacgggaataatcagg
agaaaaccggatataaaatggaagcgaaagaaggaagatcttagcaatttggttgagatt
cagaaaaaaatattgtataatgcgggtaggtatgtgaaacccggaggcgtactggtttac
agtacttgctccgttgatgtgagggaaaacgaagaggttgtgaagttttttttagctgaa
aacggtgacttcaaacgggagtcagtaaaggaattgctgcctcaggcattaaaagaaaag
gcaggagtggatgagggtatgctcaggttataccctcatattgacggaactgacggattt
ttcatagcaaggatgagaaaaatacgatag
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