Caulobacter segnis: Cseg_3890
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Entry
Cseg_3890 CDS
T01221
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cse
Caulobacter segnis
Pathway
cse03030
DNA replication
cse03430
Mismatch repair
cse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cseg_3890
03430 Mismatch repair
Cseg_3890
03440 Homologous recombination
Cseg_3890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cse03032
]
Cseg_3890
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_3890
Enzymes [BR:
cse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cseg_3890
DNA replication proteins [BR:
cse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cseg_3890
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cseg_3890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
AAA
AAA_22
AAA_5
RuvB_N
AAA_18
AAA_16
AAA_30
TsaE
AAA_14
AAA_24
AAA_19
DUF815
AAA_assoc_2
AAA_2
SRP54
AAA_28
NTPase_1
nSTAND3
AAA_7
VapE-like_dom
CbiA
SKI
Motif
Other DBs
NCBI-ProteinID:
ADG12310
UniProt:
D5VP87
LinkDB
All DBs
Position
complement(4265684..4267534)
Genome browser
AA seq
616 aa
AA seq
DB search
MADHDDLSTDSAPPWDEAPAGEDLAERDENTADIFGGSPVAPAAAAEEARPVVQDPPAET
GDAYTVLARKYRPRTFEDLIGQEAMVRTLANAFSTGRIAHAFMLTGVRGVGKTTTARLLA
RALNYETDTVKGPSVDLTTEGYHCRAIIEGRHMDVLELDAASRTKVDEMRELLDGVRYAP
VEARYKVYIIDEVHMLSTAAFNALLKTLEEPPPHAKFIFATTEIRKVPVTILSRCQRFDL
RRVEPDVLVKHFDRISAKEGARIEMDALALIARAAEGSVRDGLSLLDQAIVQTERGATVT
ATVVRDMLGLADRGQTIALYEHVMAGKTKDALEGFRALWGFGADPAVVMLDVLDHCHASA
VSKALGPDALSMPKEQAARLAAIGAHTSAGTLSRLWQMLLKAHEEVRRAPDAMAAAEMAL
IRLCYAADLPGPEEALKALRDGAPIGGGGPGGGVSVGGGGASGGAASAQAPMTLAAPGAQ
AMPVLASFDDVMALIAAKRDIGLRLDVEQYVRPINFRPGAITFEAAPGAPGNLAGRLVRF
LKEHTGQPWLVAAEGGGGAESLMERQKREEREALEQIKKDPFVASVLSAFPGAEIVEIRK
VLTPEAAPLEPDEEEG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccacgacgacctctcgaccgattccgcgccgccgtgggacgaagcgcccgcc
ggcgaagatttggctgaacgcgacgagaacaccgccgatatcttcggcggatcgccggtc
gcgcccgccgcggccgcggaagaagcgcggccggtcgtccaggatccgcccgccgagacc
ggcgacgcctatacggtgctggcgcggaagtaccggccgcgcaccttcgaggacctgatc
ggccaggaggccatggtccgcactctggccaacgccttctccaccggccgcatcgcccac
gccttcatgctcaccggcgtccgcggggtcggcaagaccacgaccgcgcgcctgctggcc
cgtgcgctcaactacgagaccgacacggtcaagggcccgtcggtcgacctgaccaccgaa
ggctaccactgccgcgccatcatcgagggccggcacatggacgtgctggagctggacgcc
gccagccgcaccaaggtcgacgagatgcgcgagctgctggacggggtgcgctacgccccg
gtcgaggcgcgctacaaggtctacatcatcgacgaagtgcacatgctgtcgacggcggcg
ttcaacgccctgctgaagacgctggaagagccgccgccgcacgccaagttcatcttcgcc
accaccgaaatccgcaaggtcccggtgacgatcctgtcgcgctgccagcgcttcgacctg
cgccgggtcgagccggacgtgctggtcaagcacttcgaccgcatctcggccaaggaaggc
gcccggatcgagatggacgccctggccctgatcgcccgcgcggccgagggctcggtgcgc
gacggcctctcgctgttggaccaagccatcgtgcagaccgagcgcggcgcgacggtcacc
gcgaccgtggtccgcgacatgctgggcctggccgaccgcggccagaccatcgcgctctac
gagcatgtgatggccggcaagaccaaggacgcgctggaaggcttccgcgcgctctggggc
ttcggcgccgatccggcggtggtgatgctcgacgtgctcgaccactgccacgcgtcggcg
gtgtccaaggcgctcgggccggacgccctgtcgatgcccaaggagcaggccgcgcgcctg
gccgccatcggcgcccacacctccgccggcacgctgtcgcgcctgtggcagatgctgctg
aaggcccatgaggaggtgcgccgcgcgcccgacgccatggccgcggccgagatggctctg
atccgcctgtgctacgccgccgacttgcccggtcccgaggaagccttgaaggccctgcgc
gacggcgcgccgatcggcggcggcggtccggggggcggcgtctcggtgggcggcggcggc
gcgtccggcggcgcggcctcggcccaggccccgatgaccctggccgcgcccggcgcccag
gccatgccggtgctggcctcgttcgacgacgtgatggccctgatcgccgccaagcgcgac
atcggccttcgcctggacgtcgagcagtacgtccgcccgatcaatttccggcccggcgcc
atcaccttcgaggccgcccccggcgcgcctggaaatctggccgggcgcctggtgcgcttc
ctcaaggagcacaccggccagccctggctggtggcggccgagggcggcggcggggccgaa
agcctgatggagcgccagaagcgcgaggagcgcgaggcgctggagcagatcaagaaggat
ccgttcgtcgcttcggtgctgtcggccttccccggcgccgagatcgtcgagatccgcaag
gtcctcacccccgaggcggccccgctggagccggacgaggaagagggatag
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