Citrobacter sedlakii: JY391_08680
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Entry
JY391_08680 CDS
T07832
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00550
Peptidoglycan biosynthesis
csed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JY391_08680 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csed01002
]
JY391_08680 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csed01011
]
JY391_08680 (dacD)
Enzymes [BR:
csed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JY391_08680 (dacD)
Peptidases and inhibitors [BR:
csed01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
JY391_08680 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
csed01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JY391_08680 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QUC31788
LinkDB
All DBs
Position
1846027..1847193
Genome browser
AA seq
388 aa
AA seq
DB search
MERRLFIAASLLATHLSTALASSTVDFAPQPPAVEAASWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSKHISPDDMVTVGRDAWAKDNPVFVGSSLMFLKQGERVSVRD
LSRGLIVDSGNDACVALADYVAGGQPQFVAMMNSYVRKLHLQDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQYNRNGLLWDKSLNVDGLKTGHTSGAG
FNLIASAVDGKRRLIAVIMGAESPKGREEQARKLLHWGQQNFDTVQILRSGKQVGAERIW
YGDKEKIALGTEQDFWMALPKAEIPHIKAKYVLDKAELEAPLTAHQRVGEIELYDRDKLI
AHWPLVTLEAVDKGGLFSRLSDYFHHKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgccgtctgtttattgccgcttcgttactcgctacgcacctttctaccgcgctc
gcgtcaagcactgtcgacttcgcgccgcagccacctgcggtagaggccgcttcatgggtg
ctgatggactacaccaccgggcaaatccttaccgccggaaatgaacatcagcagcgcaac
ccggcgagtctgaccaagctgatgaccggctacgtggttgaccgggccatcgacagcaag
cacatttctcctgacgacatggttacggttgggcgcgacgcatgggccaaagataacccg
gtgtttgtcggttcttcgctgatgtttctcaaacaaggtgaacgcgtctcggtgcgcgat
ctcagccgtggtttgattgttgattccggtaatgacgcctgcgttgcgctggcggactat
gtggccggcgggcagccgcagttcgtggcgatgatgaacagctatgtcaggaagctgcat
ttgcaggacacccatttcgagacggttcacggcctggatgcgccgggacagcacagctcc
gcgtacgatctggccgtgctttcacgggcgatcattcacggcgaacctgagttttatcac
atgtacagcgagaaaagcctgacctggaacggcatcacccagtacaaccgcaacggtctg
ctgtgggataaatcgctgaacgtcgacggcctgaaaaccggacatacttctggcgcgggc
tttaacctgattgcttccgcggttgatggcaagcggcgtcttattgcggtcattatgggg
gcagaaagcccgaagggtcgggaggaacaggcgcgtaaactgctgcattggggacagcag
aatttcgatacggtgcagatcctgcgcagcggtaagcaagtaggcgctgagcggatctgg
tatggcgataaagagaagattgcgctgggcaccgagcaggatttctggatggccttacca
aaagcggaaattcctcacatcaaagcgaaatatgtgttggataaagcggagcttgaagcg
ccgctcaccgcccatcagcgggtcggggaaatcgagctgtatgatcgcgacaagctgatt
gcccactggcctttggtgacgctggaagcagttgacaagggcggtctgttctcgcgactg
agcgactacttccaccataaagcctga
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